Merge pull request #51 from Merck/cranprep

Minor changes to ready for CRAN update

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: psm3mkv
 Title: Evaluate Partitioned Survival and State Transition Models
-Version: 0.3.1.9000
+Version: 0.3.2
 Authors@R: c(
     person("Dominic", "Muston", , "[email protected]", role = c("aut", "cre"),
            comment = c(ORCID = "0000-0003-4876-7940")),

NEWS.md

@@ -1,4 +1,11 @@
-# psm3mkv (development version)
+# psm3mkv 0.3.2
+
+# psm3mkv 0.3.2
+
+- Revised calculations of constrained restricted mean durations in internal function `calc_drmd()` and the accompanying `vignette("background-mortality")`.
+- Provide a convenience function, `compare_psm_likes()`, to compare the total log-likelihood values for the patient-level dataset after fitting PSM-simple and PSM-complex models to each combination of endpoint distributions.
+- Add citation to publication in *Applied Health Economics and Health Policy*, [DOI: 10.1007/s40258-024-00884-2 ](https://doi.org/10.1007/s40258-024-00884-2).
+- Updated license statements to 2024
 
 # psm3mkv 0.3.1
 
@@ -20,7 +27,7 @@ Several minor changes to ready the package for CRAN.
 
 # psm3mkv 0.2.1 (14 Apr 2024)
 
-Constraining calculations of restricted mean durations and the accompanying `vignette("background-mortality")` has been reworked. The calculations using integral/continuous methods was not reliable. Instead, `calc_allrmds` now has a `rmdmethod="disc"` option to allow for discretized calculations for a given timestep (defaulting at one week). There is a new collection of functions in `discrmd.R` to provide for this, as well as `constrain_survprob()` function, which constrains a vector of survival estimates at given times such that the underlying hazard is at least as great as in an accompanying lifetable.
+Constraining calculations of restricted mean durations and the accompanying `vignette("background-mortality")` has been reworked. The calculations using integral/continuous methods was not reliable. Instead, `calc_allrmds()` now has a `rmdmethod="disc"` option to allow for discretized calculations for a given timestep (defaulting at one week). There is a new collection of functions in `discrmd.R` to provide for this, as well as `constrain_survprob()` function, which constrains a vector of survival estimates at given times such that the underlying hazard is at least as great as in an accompanying lifetable.
 
 # psm3mkv 0.2.0 (26 Jan 2024)
 

cran-comments.md

@@ -1,10 +1,3 @@
-## Resubmission
-
-This is a resubmission. In this version I have:
-- Shortened the package title in DESCRIPTION as requested
-- Edited the citation as requested in the Description field of DESCRIPTION
-- Removed information messages from graph_survs() in probgraphs.R
-
 ## Test environments
 
 * win-builder (devel)
@@ -18,9 +11,7 @@ This is a resubmission. In this version I have:
 
 ## R CMD check results
 
-0 errors | 0 warnings | 1 note
-
-* This is a new release.
+0 errors | 0 warnings | 0 notes