{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":500545957,"defaultBranch":"main","name":"champkit","ownerLogin":"SBU-BMI","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-06-06T18:18:31.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/9609848?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1682387676.0","currentOid":""},"activityList":{"items":[{"before":"51be0b36608a4380fac58bc593039fed041073a3","after":"e94cc6bcdc849a811251e943868c6bd1da5dbe2f","ref":"refs/heads/main","pushedAt":"2023-06-02T15:13:32.949Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"add references to journal paper + update git commit for reproducibility","shortMessageHtmlLink":"add references to journal paper + update git commit for reproducibility"}},{"before":"af6ef91481aac91194edb4473da67d353396c9f0","after":null,"ref":"refs/heads/enh/metrics","pushedAt":"2023-04-25T01:54:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"}},{"before":"b98f80bcf887041e7cb7a68aa035c33f5f03d214","after":"51be0b36608a4380fac58bc593039fed041073a3","ref":"refs/heads/main","pushedAt":"2023-04-25T01:54:32.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"[ENH] add multi-class eval and more metrics (#7)\n\n* add fn,fp,tn,tp + make --directory required\r\n\r\n* use --binary-metrics only if num_classes > 2\r\n\r\n* add space between dir and other part of validate.py command\r\n\r\n* use torchmetrics 0.11.4 classes\r\n\r\n* use torchmetrics=0.11.4\r\n\r\n* print whether using binary or multiclass metrics\r\n\r\n* fix: use multi-class metrics\r\n\r\nAll metrics are multi-class because we accept no fewer than 2 classes for each model.\r\nThe metrics are from torchmetrics, and we have to install version >=0.11 for this.\r\nThis also prints the per-class metrics.\r\n\r\n* print a summary of eval results + save figure with eval plots\r\n\r\n* use multi-class auroc","shortMessageHtmlLink":"[ENH] add multi-class eval and more metrics (#7)"}},{"before":"77e07ebe9e67030431fdded3c4e1df636e1a9d94","after":"af6ef91481aac91194edb4473da67d353396c9f0","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-25T01:54:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"use multi-class auroc","shortMessageHtmlLink":"use multi-class auroc"}},{"before":"abe45c36aae9def2e28233c24f7b7e484fd61657","after":"77e07ebe9e67030431fdded3c4e1df636e1a9d94","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-19T17:20:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"print a summary of eval results + save figure with eval plots","shortMessageHtmlLink":"print a summary of eval results + save figure with eval plots"}},{"before":"242c2e0efe3dfde844f62d658b53456281eefb4a","after":"abe45c36aae9def2e28233c24f7b7e484fd61657","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-19T00:34:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"fix: use multi-class metrics\n\nAll metrics are multi-class because we accept no fewer than 2 classes for each model.\nThe metrics are from torchmetrics, and we have to install version >=0.11 for this.\nThis also prints the per-class metrics.","shortMessageHtmlLink":"fix: use multi-class metrics"}},{"before":"d4066e66ad485d1591bf4cea29e23297e9bdf1bd","after":"242c2e0efe3dfde844f62d658b53456281eefb4a","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T01:47:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"print whether using binary or multiclass metrics","shortMessageHtmlLink":"print whether using binary or multiclass metrics"}},{"before":"2a3874ee65a4177313efa1a477b0114f944d832d","after":"d4066e66ad485d1591bf4cea29e23297e9bdf1bd","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T01:44:58.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"use torchmetrics=0.11.4","shortMessageHtmlLink":"use torchmetrics=0.11.4"}},{"before":"75c84fa083651bb4d7d0e8baf310f98e1d8c90c1","after":"2a3874ee65a4177313efa1a477b0114f944d832d","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T01:43:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"use torchmetrics 0.11.4 classes","shortMessageHtmlLink":"use torchmetrics 0.11.4 classes"}},{"before":"2e641b1052594633a3d10d38a7c9ec9f65128fde","after":"75c84fa083651bb4d7d0e8baf310f98e1d8c90c1","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T01:25:30.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"add space between dir and other part of validate.py command","shortMessageHtmlLink":"add space between dir and other part of validate.py command"}},{"before":"9335d5eafe1c1ba9360888f3f3935fbf41194743","after":"2e641b1052594633a3d10d38a7c9ec9f65128fde","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T01:17:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"use --binary-metrics only if num_classes > 2","shortMessageHtmlLink":"use --binary-metrics only if num_classes > 2"}},{"before":null,"after":"9335d5eafe1c1ba9360888f3f3935fbf41194743","ref":"refs/heads/enh/metrics","pushedAt":"2023-04-14T00:51:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"add fn,fp,tn,tp + make --directory required","shortMessageHtmlLink":"add fn,fp,tn,tp + make --directory required"}},{"before":"ff1eba682e277cd8d8771777cad21c36e5f3ec8d","after":null,"ref":"refs/heads/enh/add-mhist-sweeps","pushedAt":"2023-04-14T00:40:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"}},{"before":"8c7084514ee33288223a0fbde085b5e09b881cc4","after":"b98f80bcf887041e7cb7a68aa035c33f5f03d214","ref":"refs/heads/main","pushedAt":"2023-04-14T00:40:36.000Z","pushType":"pr_merge","commitsCount":1,"pusher":{"login":"kaczmarj","name":"Jakub Kaczmarzyk","path":"/kaczmarj","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17690870?s=80&v=4"},"commit":{"message":"[ENH] add mhist sweeps and sweep to run more seeds (#6)\n\n* add file with two extra random seeds\r\n\r\n* add mhist hyperparam sweep","shortMessageHtmlLink":"[ENH] add mhist sweeps and sweep to run more seeds (#6)"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAADOZZ9QQA","startCursor":null,"endCursor":null}},"title":"Activity ยท SBU-BMI/champkit"}