{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":125840716,"defaultBranch":"master","name":"stag-mwc","ownerLogin":"ctmrbio","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2018-03-19T10:27:50.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/22588791?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1710513116.0","currentOid":""},"activityList":{"items":[{"before":"8136f63a3586803e18d25d09bccfe94f54087cd0","after":"10f941db6a340144df042ec4d8bedaed92c5d191","ref":"refs/heads/develop","pushedAt":"2024-08-12T08:46:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update HUMAnN3 to v3.9","shortMessageHtmlLink":"Update HUMAnN3 to v3.9"}},{"before":"0c15e99222ac2ede7e4af377d82b2f2b72fed049","after":"8136f63a3586803e18d25d09bccfe94f54087cd0","ref":"refs/heads/develop","pushedAt":"2024-08-09T11:39:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Use gzip instead of pigz for kraken2 output compression","shortMessageHtmlLink":"Use gzip instead of pigz for kraken2 output compression"}},{"before":"c56a4833321bc1e562257c7845215f25cbf5ffc3","after":"0c15e99222ac2ede7e4af377d82b2f2b72fed049","ref":"refs/heads/develop","pushedAt":"2024-04-11T09:39:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update changelog","shortMessageHtmlLink":"Update changelog"}},{"before":"a28dd191be49d49178540674757ff3323da71f82","after":"c56a4833321bc1e562257c7845215f25cbf5ffc3","ref":"refs/heads/develop","pushedAt":"2024-04-11T09:37:57.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Remove outdated amrplusplus scripts","shortMessageHtmlLink":"Remove outdated amrplusplus scripts"}},{"before":"ef444a8156e86a96623d1efed255b0830cb9c78b","after":"a28dd191be49d49178540674757ff3323da71f82","ref":"refs/heads/develop","pushedAt":"2024-04-11T09:17:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Formatting: Break long lines","shortMessageHtmlLink":"Formatting: Break long lines"}},{"before":"15d33ea64143740623e8aa6b0810bdc8d7266b34","after":"ef444a8156e86a96623d1efed255b0830cb9c78b","ref":"refs/heads/develop","pushedAt":"2024-03-26T12:21:16.000Z","pushType":"pr_merge","commitsCount":4,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Merge pull request #223 from ctmrbio/parameterize-singularity-images\n\nParameterize container images","shortMessageHtmlLink":"Merge pull request #223 from ctmrbio/parameterize-singularity-images"}},{"before":"6d7849f6702bf5fd6f1a7b461d61cd773b8d0cc2","after":"70b434371059b4af7a6d8cc9ce870e14a6aa5138","ref":"refs/heads/parameterize-singularity-images","pushedAt":"2024-03-15T14:39:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":null,"after":"6d7849f6702bf5fd6f1a7b461d61cd773b8d0cc2","ref":"refs/heads/parameterize-singularity-images","pushedAt":"2024-03-15T14:31:56.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Change to config[containers] everywhere, and remove unneeded str conversions","shortMessageHtmlLink":"Change to config[containers] everywhere, and remove unneeded str conv…"}},{"before":"bbb52195bf3b7919bb88690bab51255cb629a36a","after":"15d33ea64143740623e8aa6b0810bdc8d7266b34","ref":"refs/heads/develop","pushedAt":"2024-03-15T13:10:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update CHANGELOG","shortMessageHtmlLink":"Update CHANGELOG"}},{"before":"31bb4ac7d7efbdfabb7878e341d52adf5b6fbc92","after":"bbb52195bf3b7919bb88690bab51255cb629a36a","ref":"refs/heads/develop","pushedAt":"2024-03-15T13:08:50.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Add basic profile for NAISS PDC Dardel","shortMessageHtmlLink":"Add basic profile for NAISS PDC Dardel"}},{"before":"2949f1eb9d9e97608a89b48de66f863d4409fe3b","after":"2c6e62cc2702bb31e4ae1cc968651f9408575446","ref":"refs/heads/master","pushedAt":"2024-03-01T13:25:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update ctmr_gandalf profile, use --account","shortMessageHtmlLink":"Update ctmr_gandalf profile, use --account"}},{"before":null,"after":"424b8e70e1f08c6a237720acbd59019d1460d12e","ref":"refs/heads/mapping-counts-in-report","pushedAt":"2024-02-19T12:34:42.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Draft for adding bbmap count summaries to report zip","shortMessageHtmlLink":"Draft for adding bbmap count summaries to report zip"}},{"before":"2949f1eb9d9e97608a89b48de66f863d4409fe3b","after":"402c30c0c2a3c2129f9a495c0e8b4fdb14e1f8eb","ref":"refs/heads/dardel-profile","pushedAt":"2024-02-02T09:22:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Add draft profile for PDC Dardel","shortMessageHtmlLink":"Add draft profile for PDC Dardel"}},{"before":null,"after":"2949f1eb9d9e97608a89b48de66f863d4409fe3b","ref":"refs/heads/dardel-profile","pushedAt":"2024-02-02T09:22:01.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Fix broken kraken2/bowtie2 host removal resources settings","shortMessageHtmlLink":"Fix broken kraken2/bowtie2 host removal resources settings"}},{"before":"f38835800c46ff5400a71de9611e24f49c057556","after":"2949f1eb9d9e97608a89b48de66f863d4409fe3b","ref":"refs/heads/master","pushedAt":"2024-01-17T07:04:55.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Fix broken kraken2/bowtie2 host removal resources settings","shortMessageHtmlLink":"Fix broken kraken2/bowtie2 host removal resources settings"}},{"before":null,"after":"86c48dd89dc1e6eccb3e7df5987657023a36a25f","ref":"refs/heads/metaphlan_count_update","pushedAt":"2023-11-27T13:40:55.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"AroArz","name":"Aron Arzoomand","path":"/AroArz","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/51719360?s=80&v=4"},"commit":{"message":"process_readstats","shortMessageHtmlLink":"process_readstats"}},{"before":"dccafde3dd0af2872302ba46a3774116c5d4a726","after":"f38835800c46ff5400a71de9611e24f49c057556","ref":"refs/heads/master","pushedAt":"2023-11-17T13:58:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update .readthedocs.yaml","shortMessageHtmlLink":"Update .readthedocs.yaml"}},{"before":"87c240d635e22155cdfb2ce26afb5a099319dece","after":"dccafde3dd0af2872302ba46a3774116c5d4a726","ref":"refs/heads/master","pushedAt":"2023-11-17T13:42:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Create .readthedocs.yaml","shortMessageHtmlLink":"Create .readthedocs.yaml"}},{"before":"804b6bfdfe544a5f9ac2704a201f4c4778ea45f0","after":"31bb4ac7d7efbdfabb7878e341d52adf5b6fbc92","ref":"refs/heads/develop","pushedAt":"2023-06-14T13:13:31.114Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Fix slurm profile","shortMessageHtmlLink":"Fix slurm profile"}},{"before":"a66ad5d14164d7920fe828e8b08898c6c6f9fbc6","after":"804b6bfdfe544a5f9ac2704a201f4c4778ea45f0","ref":"refs/heads/develop","pushedAt":"2023-06-13T13:25:04.150Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Remove mention of assembly docs overview","shortMessageHtmlLink":"Remove mention of assembly docs overview"}},{"before":"64bf3a94c3cae3ce191533d360940b4c13b4cb82","after":"a66ad5d14164d7920fe828e8b08898c6c6f9fbc6","ref":"refs/heads/develop","pushedAt":"2023-06-13T10:58:18.395Z","pushType":"push","commitsCount":4,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Prepare for new development cycle","shortMessageHtmlLink":"Prepare for new development cycle"}},{"before":"e2df32d3071f937606f3d83f3c798413495f20f4","after":"87c240d635e22155cdfb2ce26afb5a099319dece","ref":"refs/heads/master","pushedAt":"2023-06-13T10:04:39.038Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Fix typo","shortMessageHtmlLink":"Fix typo"}},{"before":"9824494119b39dc86520b16ba33d1309d957b170","after":"e2df32d3071f937606f3d83f3c798413495f20f4","ref":"refs/heads/master","pushedAt":"2023-06-13T10:04:09.455Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update docs and overview graph","shortMessageHtmlLink":"Update docs and overview graph"}},{"before":"39f1cd0de4b4ea9786c31b21c43cce347c9c3289","after":"9824494119b39dc86520b16ba33d1309d957b170","ref":"refs/heads/master","pushedAt":"2023-06-13T09:50:33.684Z","pushType":"pr_merge","commitsCount":25,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Merge pull request #220 from ctmrbio/develop\n\nRelease v0.7","shortMessageHtmlLink":"Merge pull request #220 from ctmrbio/develop"}},{"before":"33c70294159c52a056495f8d4d5585925cb4e3bb","after":"64bf3a94c3cae3ce191533d360940b4c13b4cb82","ref":"refs/heads/develop","pushedAt":"2023-06-13T09:25:14.790Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Prepare for v0.7 release","shortMessageHtmlLink":"Prepare for v0.7 release"}},{"before":"e3ed492e8d2753ad10d39894750226fea468f96e","after":"33c70294159c52a056495f8d4d5585925cb4e3bb","ref":"refs/heads/develop","pushedAt":"2023-06-13T09:21:49.458Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"HUMAnN critical tmpdir removal bug fixed","shortMessageHtmlLink":"HUMAnN critical tmpdir removal bug fixed"}},{"before":"587778e39b377816a77d624487311662e6df16fd","after":"e3ed492e8d2753ad10d39894750226fea468f96e","ref":"refs/heads/develop","pushedAt":"2023-06-08T14:15:26.379Z","pushType":"pr_merge","commitsCount":11,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Merge pull request #219 from ctmrbio/improve-host-removal\n\nImprove host removal","shortMessageHtmlLink":"Merge pull request #219 from ctmrbio/improve-host-removal"}},{"before":"deae3ecc79deb277a1128d062e9bd7711ab7a2a5","after":"047fe3c6620bfeacd9f09abca537453cdf423a8a","ref":"refs/heads/improve-host-removal","pushedAt":"2023-06-07T09:46:35.457Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Update docs about qc+host removal table","shortMessageHtmlLink":"Update docs about qc+host removal table"}},{"before":"c2a25bfb61f890d0803ab0982809faf4c04ad32b","after":"deae3ecc79deb277a1128d062e9bd7711ab7a2a5","ref":"refs/heads/improve-host-removal","pushedAt":"2023-06-07T09:45:39.351Z","pushType":"push","commitsCount":2,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Updated CHANGELOG","shortMessageHtmlLink":"Updated CHANGELOG"}},{"before":"7fad6f23915c2bedeb3e9992a4cf95e02ea9309a","after":"c2a25bfb61f890d0803ab0982809faf4c04ad32b","ref":"refs/heads/improve-host-removal","pushedAt":"2023-06-02T14:52:21.570Z","pushType":"push","commitsCount":1,"pusher":{"login":"boulund","name":"Fredrik Boulund","path":"/boulund","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/4919402?s=80&v=4"},"commit":{"message":"Change containers for bowtie2 and samtools","shortMessageHtmlLink":"Change containers for bowtie2 and samtools"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEl-KIeAA","startCursor":null,"endCursor":null}},"title":"Activity · ctmrbio/stag-mwc"}