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Meeting Notes 22.10.2021

Casper Welzel Andersen edited this page Nov 5, 2021 · 1 revision

dic2owl

Standardize setup and testing in dic2owl.

EMMO-Crystallography

Strategy

James – Strategy.
Bottom-up approach. Instead of starting from defining a "Crystal", let's instead start from specific CIF files and its contents to see what ontological individuals are created from the key/value-pairs in a CIF file, ontologize this, and then move further up.

Matthias: Combining bottom-up and top-down works well in practice. He had an example from the EU-project INTERSECT, using AiiDA and integrating it with the ontology and other software.

Dimensionality

Rickard brings the subject back to a previous discussion regarding dimensionality: What is the lowest number of dimensions that still constitutes a crystal?
Saulius: It should have periodicity and have an ideally delta-like function if Fourier transformed.

Maybe name anything less than 3 dimensions as "periodic systems"?

CIF/DDL has no requirement to specify all 3 dimensions. While CIF does not require 3 dimensions, other properties of CIF might assume that 3 dimensions are given. It would be nice to see if the ontology can check whether other CIF properties require 3 dimensions.

Launched into a discussion based on the EMMO definition of "Material" concerning whether a Crystal should or should not be a Continuum as defined by EMMO. It seems EMMO defines these terms with respect to the properties, not scale/size.