{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":579790249,"defaultBranch":"main","name":"ADRIA-synthetic-data","ownerLogin":"open-AIMS","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-12-18T23:14:34.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/68976138?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1718771403.0","currentOid":""},"activityList":{"items":[{"before":"5889fa143e851e35800af4a33ca028b39d9b9b31","after":"a9559e5bfa5a277a9daa0b4934cdb478e62633f2","ref":"refs/heads/data-package-updates","pushedAt":"2024-07-11T07:10:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Explicitly set CRS prior to saving data package","shortMessageHtmlLink":"Explicitly set CRS prior to saving data package"}},{"before":null,"after":"5889fa143e851e35800af4a33ca028b39d9b9b31","ref":"refs/heads/data-package-updates","pushedAt":"2024-06-19T04:30:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Update file structure to ADRIA domain `v060_rc1`","shortMessageHtmlLink":"Update file structure to ADRIA domain v060_rc1"}},{"before":"45b0a8eba8f9db33dd7cdc8b0596b2d84b67f875","after":"8274fe636dcb5173960e3b56af49203aeea87ada","ref":"refs/heads/main","pushedAt":"2024-05-26T22:53:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix wave data loading in plotting example","shortMessageHtmlLink":"Fix wave data loading in plotting example"}},{"before":"16025a7571790425ebdd048e9969cd5afb8d4af4","after":"45b0a8eba8f9db33dd7cdc8b0596b2d84b67f875","ref":"refs/heads/main","pushedAt":"2024-05-20T05:20:07.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add additional visualisations and alter coral cover visualisation to only plot aggregated species","shortMessageHtmlLink":"Add additional visualisations and alter coral cover visualisation to …"}},{"before":"746cc11cfb907b392103eee3e50084b84e1dfb13","after":"16025a7571790425ebdd048e9969cd5afb8d4af4","ref":"refs/heads/main","pushedAt":"2024-05-20T05:19:48.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add additional visualisations and alter coral cover visualisation to only plot aggregated species","shortMessageHtmlLink":"Add additional visualisations and alter coral cover visualisation to …"}},{"before":"81fe50f4d995ef92f508d9ecd210eec0773953e3","after":"746cc11cfb907b392103eee3e50084b84e1dfb13","ref":"refs/heads/main","pushedAt":"2024-05-20T05:18:55.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add additional visualisations and alter coral cover visualisation to only plot aggregated species","shortMessageHtmlLink":"Add additional visualisations and alter coral cover visualisation to …"}},{"before":"cf45ae443fe2fb6fc987e0c47b33860826a87904","after":"81fe50f4d995ef92f508d9ecd210eec0773953e3","ref":"refs/heads/main","pushedAt":"2024-05-20T05:14:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add new plotting functions and formatting","shortMessageHtmlLink":"Add new plotting functions and formatting"}},{"before":"ded09bb2a53a488722930718e2d1030031138244","after":"cf45ae443fe2fb6fc987e0c47b33860826a87904","ref":"refs/heads/main","pushedAt":"2024-05-20T05:12:52.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add weights calculation to coral cover preprocessing and option to use GaussianCopula model","shortMessageHtmlLink":"Add weights calculation to coral cover preprocessing and option to us…"}},{"before":"1283317535c11449131636e5d38cb19d3ddf7c45","after":"ded09bb2a53a488722930718e2d1030031138244","ref":"refs/heads/main","pushedAt":"2024-05-20T05:08:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add new plotting functions and formatting","shortMessageHtmlLink":"Add new plotting functions and formatting"}},{"before":"eb91cb84d8886cfb6cf807d6ab953d25abfacc97","after":"1283317535c11449131636e5d38cb19d3ddf7c45","ref":"refs/heads/main","pushedAt":"2024-05-20T05:06:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix metadata definition for connectivity and coral cover data","shortMessageHtmlLink":"Fix metadata definition for connectivity and coral cover data"}},{"before":"19576e284da761c1175ce59ec0d925c87dc355ab","after":"eb91cb84d8886cfb6cf807d6ab953d25abfacc97","ref":"refs/heads/main","pushedAt":"2024-05-20T05:03:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix metadata definition for wave data","shortMessageHtmlLink":"Fix metadata definition for wave data"}},{"before":"ab20efd6e991cbeb7e16753cc75320013b6f8c8e","after":"19576e284da761c1175ce59ec0d925c87dc355ab","ref":"refs/heads/main","pushedAt":"2024-05-20T05:02:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Calculate size class weightings based on original cover plus make sure sites with 0 k do not have cover","shortMessageHtmlLink":"Calculate size class weightings based on original cover plus make sur…"}},{"before":"93503d4c19fc071ef95d640b90c7ac4e0d6e323e","after":"ab20efd6e991cbeb7e16753cc75320013b6f8c8e","ref":"refs/heads/main","pushedAt":"2024-05-20T05:01:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix incorrectly applied transformation from metres to coordinate system","shortMessageHtmlLink":"Fix incorrectly applied transformation from metres to coordinate system"}},{"before":"3ea810ae854c027061a036180d2e5e044ca70e01","after":"93503d4c19fc071ef95d640b90c7ac4e0d6e323e","ref":"refs/heads/main","pushedAt":"2024-05-20T05:00:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add anonymised site data as output of site data model for plotting","shortMessageHtmlLink":"Add anonymised site data as output of site data model for plotting"}},{"before":"47290c97c54a16f01e95b6bf7c6a866cea19434e","after":"3ea810ae854c027061a036180d2e5e044ca70e01","ref":"refs/heads/main","pushedAt":"2024-05-20T04:58:52.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add timers to models","shortMessageHtmlLink":"Add timers to models"}},{"before":"d083820689602ff208fb0effa9a9990442525c52","after":"47290c97c54a16f01e95b6bf7c6a866cea19434e","ref":"refs/heads/main","pushedAt":"2024-03-20T06:40:53.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add proportional adjustment use in TVAE model to avoid sites having cover>k","shortMessageHtmlLink":"Add proportional adjustment use in TVAE model to avoid sites having c…"}},{"before":"a15a146545e6e46a24f90c6512696bb20de210f7","after":"d083820689602ff208fb0effa9a9990442525c52","ref":"refs/heads/main","pushedAt":"2024-03-20T06:40:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix missing transform in connectivity model and incorrectly applied elif chain for model choice","shortMessageHtmlLink":"Fix missing transform in connectivity model and incorrectly applied e…"}},{"before":"d315107ce63e3a2e85f457d6e0368014a70968bb","after":"a15a146545e6e46a24f90c6512696bb20de210f7","ref":"refs/heads/main","pushedAt":"2024-03-20T06:39:23.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add name change from `nspecies` to `ngroups` to reflect that cover is now aggregated","shortMessageHtmlLink":"Add name change from nspecies to ngroups to reflect that cover is…"}},{"before":"7f48f70a02d7a0f66287ade8d94afcc6f20e7678","after":"d315107ce63e3a2e85f457d6e0368014a70968bb","ref":"refs/heads/main","pushedAt":"2024-03-20T06:38:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Adjust preprocessing function for cover so synth data is generated for functional groups and later distributed over size class\n\nThis dramatically reduces runtime","shortMessageHtmlLink":"Adjust preprocessing function for cover so synth data is generated fo…"}},{"before":"af11ed1c7e56ce99b650a5f54a5bf367ecb5eb1e","after":"7f48f70a02d7a0f66287ade8d94afcc6f20e7678","ref":"refs/heads/main","pushedAt":"2024-03-20T06:37:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add function to distribution generated cover over size classes according to ReefMod size class distribution","shortMessageHtmlLink":"Add function to distribution generated cover over size classes accord…"}},{"before":"86fbb4f70dd458616d5003ca2ab29395b2208a95","after":"af11ed1c7e56ce99b650a5f54a5bf367ecb5eb1e","ref":"refs/heads/main","pushedAt":"2024-03-20T06:37:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add proportional adjustment function for coral cover so that no site exceeds synthetic k","shortMessageHtmlLink":"Add proportional adjustment function for coral cover so that no site …"}},{"before":"a54070b81b2af290396126c90624be4b24eed4ce","after":"86fbb4f70dd458616d5003ca2ab29395b2208a95","ref":"refs/heads/main","pushedAt":"2024-03-20T06:36:06.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix filename definition for connectivity data to reflect changes in ADRIA Domain structure","shortMessageHtmlLink":"Fix filename definition for connectivity data to reflect changes in A…"}},{"before":"9422418aae7d606ffb3e77a11d6cffa971581cc3","after":"a54070b81b2af290396126c90624be4b24eed4ce","ref":"refs/heads/main","pushedAt":"2024-03-20T06:35:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix input to plotting functions in environmental data example","shortMessageHtmlLink":"Fix input to plotting functions in environmental data example"}},{"before":"b3fc723361e11a26d06297afaf727e01c63dad31","after":"9422418aae7d606ffb3e77a11d6cffa971581cc3","ref":"refs/heads/main","pushedAt":"2024-03-20T06:34:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add generalised `synth_id` to plotting example","shortMessageHtmlLink":"Add generalised synth_id to plotting example"}},{"before":"0c60e46505fdb59381912da863728fdda864fe95","after":"b3fc723361e11a26d06297afaf727e01c63dad31","ref":"refs/heads/main","pushedAt":"2024-03-20T06:33:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Add `convert_to_polygons` function for converting site areas and locations into polygons","shortMessageHtmlLink":"Add convert_to_polygons function for converting site areas and loca…"}},{"before":"fbd9c401f1ea9ba27fe86959f3faaa69272ed4f0","after":"0c60e46505fdb59381912da863728fdda864fe95","ref":"refs/heads/main","pushedAt":"2024-01-12T06:09:22.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix metres to lat/long conversion","shortMessageHtmlLink":"Fix metres to lat/long conversion"}},{"before":"84d36c3490e381f08ca08a0e15960da9138a821c","after":"fbd9c401f1ea9ba27fe86959f3faaa69272ed4f0","ref":"refs/heads/main","pushedAt":"2023-11-17T04:34:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Create LICENSE","shortMessageHtmlLink":"Create LICENSE"}},{"before":"53c6be2d692d93992164b7472001ce00ce703bd3","after":"84d36c3490e381f08ca08a0e15960da9138a821c","ref":"refs/heads/main","pushedAt":"2023-09-06T05:04:48.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Fix missing lat,long conversion in site data","shortMessageHtmlLink":"Fix missing lat,long conversion in site data"}},{"before":"076c98a8bafd2dbffc0e717923615b2ceb7bbfc6","after":"53c6be2d692d93992164b7472001ce00ce703bd3","ref":"refs/heads/main","pushedAt":"2023-09-04T01:17:55.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Merge pull request #24 from open-AIMS/test-full-data-package-process\n\nCorrections to example for creating full data package","shortMessageHtmlLink":"Merge pull request #24 from open-AIMS/test-full-data-package-process"}},{"before":"2d58ad67f70e22d28293035f5f2b2c0f50597899","after":"b05011706018d75339575a78c87f1d0cd1341257","ref":"refs/heads/test-full-data-package-process","pushedAt":"2023-09-04T01:15:54.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"Rosejoycrocker","name":"Rose Crocker","path":"/Rosejoycrocker","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56939532?s=80&v=4"},"commit":{"message":"Corrections to file for creating whole data package\n\n- fix error in defining synth data package root.\n- add replicates and samples args for environmental data\n-remove data quality testing for simplicity (this can be done in other files.","shortMessageHtmlLink":"Corrections to file for creating whole data package"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEfILMFQA","startCursor":null,"endCursor":null}},"title":"Activity · open-AIMS/ADRIA-synthetic-data"}