{"payload":{"pageCount":1,"repositories":[{"type":"Public","name":"website","owner":"luquelab","isFork":false,"description":"Luque Lab Website ","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":6,"starsCount":0,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-09-10T10:27:33.509Z"}},{"type":"Public","name":"pyCapsid","owner":"luquelab","isFork":false,"description":"Python package to extract quasi-rigid domains in protein shells and other macromolecular complexes.","allTopics":["bioinformatics","structural-biology","viruses","biophysics"],"primaryLanguage":{"name":"HTML","color":"#e34c26"},"pullRequestCount":0,"issueCount":27,"starsCount":5,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2024-02-05T23:31:32.365Z"}},{"type":"Public","name":"aurora_vogel_athena","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":4,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-12-21T16:55:41.005Z"}},{"type":"Public","name":"dynamics","owner":"luquelab","isFork":false,"description":"Temporary public repository","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":14,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-11-25T23:53:01.106Z"}},{"type":"Public","name":"AI_lab_assistant","owner":"luquelab","isFork":false,"description":"Interactive AI agent specialized on the Luque Lab domain knowledge","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-10-15T15:30:35.311Z"}},{"type":"Public","name":"GoldSim","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-22T23:54:20.756Z"}},{"type":"Public","name":"Athena","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":1,"issueCount":1,"starsCount":1,"forksCount":5,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-11T21:01:12.709Z"}},{"type":"Public","name":"capsid-generator","owner":"luquelab","isFork":false,"description":"Generate and visualize capsid models.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-08-11T01:11:11.724Z"}},{"type":"Public","name":"HelloWorld","owner":"luquelab","isFork":false,"description":"Running the HelloWorld program","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-04-19T02:46:14.397Z"}},{"type":"Public template","name":"project_template","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":1,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-15T18:27:41.756Z"}},{"type":"Public","name":"rigid_domain_subdivision","owner":"luquelab","isFork":false,"description":"Mechanical subdivision of viral capsids via Gaussian Network Models.","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2023-03-13T21:35:21.457Z"}},{"type":"Public","name":"cbrown_thesis_athena","owner":"luquelab","isFork":false,"description":"Athena overview for Colin Brown's Thesis.","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-12-15T05:20:51.278Z"}},{"type":"Public","name":"Lee_etal_CSBJ_2022","owner":"luquelab","isFork":false,"description":"Predicting the capsid architecture of phages from metagenomic data","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":0,"issueCount":1,"starsCount":2,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-04-21T15:48:44.880Z"}},{"type":"Public","name":"VAN","owner":"luquelab","isFork":false,"description":"Virus Anatomy Navigator","allTopics":[],"primaryLanguage":{"name":"Jupyter Notebook","color":"#DA5B0B"},"pullRequestCount":1,"issueCount":2,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2022-03-23T01:37:24.329Z"}},{"type":"Public","name":"Cobarrubia_etal_FrontPhys_2021","owner":"luquelab","isFork":false,"description":"Codes and instructions to replicate the research published in Cobarrubia et al. Frontiers in Physics 2021.","allTopics":["particles","statistical-analysis","physical-modeling","mucus","anomalous-diffusion"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-11T21:44:33.265Z"}},{"type":"Public","name":"Caitlin-Athena","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-10T20:48:16.759Z"}},{"type":"Public","name":"Jessica_test_repo","owner":"luquelab","isFork":false,"description":"Jessica's testing repo for the Athena page","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-11-05T04:14:24.892Z"}},{"type":"Public","name":"test-jtd","owner":"luquelab","isFork":false,"description":"Test Just-The-Docs GitHub page Jekyll theme","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-09-07T04:34:17.890Z"}},{"type":"Public","name":"George_Mullinix_etal_2021","owner":"luquelab","isFork":false,"description":"This repository is associated with the publication George, Mullinix et al 2021. It contains the codes associated to measuring the geometrical properties of corals and assessing their association with the competitive outcomes against benthic competitors.","allTopics":["competition","geometry","statistical-learning","coral"],"primaryLanguage":{"name":"R","color":"#198CE7"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":"MIT License","participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-05-19T00:00:22.340Z"}},{"type":"Public","name":"small_tailed_phage_genomes","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":null,"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2021-05-14T19:21:00.549Z"}},{"type":"Public","name":"hkcage","owner":"luquelab","isFork":false,"description":"pyhton bundle that extends the hkcage tool in Chimera X to incorporate multiple icosahedral lattices","allTopics":[],"primaryLanguage":{"name":"Python","color":"#3572A5"},"pullRequestCount":0,"issueCount":0,"starsCount":1,"forksCount":1,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2020-12-02T22:56:24.259Z"}},{"type":"Public","name":"coral-perimeter","owner":"luquelab","isFork":false,"description":"","allTopics":[],"primaryLanguage":{"name":"MATLAB","color":"#e16737"},"pullRequestCount":0,"issueCount":0,"starsCount":0,"forksCount":0,"license":null,"participation":null,"lastUpdated":{"hasBeenPushedTo":true,"timestamp":"2015-10-08T20:49:27.552Z"}}],"repositoryCount":22,"userInfo":null,"searchable":true,"definitions":[],"typeFilters":[{"id":"all","text":"All"},{"id":"public","text":"Public"},{"id":"source","text":"Sources"},{"id":"fork","text":"Forks"},{"id":"archived","text":"Archived"},{"id":"template","text":"Templates"}],"compactMode":false},"title":"luquelab repositories"}