Describes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool
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Updated
Oct 29, 2021
Describes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool
⏳ Online graphical interface to explore age-related gene expression alterations in 49 GTEx human tissues
COMP479 - Machine Learning final project at Loyola University Chicago.
An R interface to the GTEx Portal API
Blood-based multi-tissue gene expression inference with Bayesian regression
Login template with Firebase GetX
Tejaas - a tool for discovering trans-eQTLs
🩺 Assessing StringTie, Salmon, and Kallisto with simulated RNA-Seq reads with noises introduced in read- and annotation-level.
COMP479 - Machine Learning final project at Loyola University Chicago.
Multithreading, data handling, and file manipulation for the GTExSnake pipeline
🧬 Tissue-specific gene embeddings trained on GTEx data
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
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