A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
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Updated
Mar 15, 2023 - JavaScript
A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
Regression with Summary Statistics.
GWAS summary statistics files QC tool
A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
Regression with Summary Statistics exploiting Network Topology.
BWMR (Bayesian Weighted Mendelian Randomization)
Older repo for MRLocus. See new website for software usage guide:
Tool for integrative gene-based association analysis using GWAS summary stats
Code and simulations using interaction-LD score regression
Software to infer latent pleiotropic components from GWAS summary data
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
Tools for preprocessing, QC, and preliminary analyses from raw UK BioBank data
Make interactive LocusZoom plots from a local GWAS file
MultiVariate Polygenic Mixture Model
Full results to accompany Zhu and Stephens (2018).
Script for designing a manhattan plot.
Mendelian Randomization approach using Cross Ancestral Model
Python package for reading, combining, meta-analyzing, and saving GWAS summary statistics data.
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