Analysis of single cell datasets using dreamlet software

Here we present analysis code, data and results from 4 public datasets.

Novel Alzheimer's snRNA-seq data

Generated as part of this work, and currently public
PsychAD project and data
Analysis code: PsychAD_r0_analysis.Rmd
Results: PsychAD_r0_analysis.html

Reanalysis of external Alzheimer's snRNA-seq data

Mathys, et al. Cell (2023)
Data: MIT / ROSMAP study
Analysis code: Mathys_2023_Major_Cell_Type.Rmd
Results: Mathys_2023_Major_Cell_Type.html

Bone metastases from prostate cancer

Kfoury, et al. Cancer Cell (2021)
Download and format data: Kfoury_CancerCell_2021_get_data.Rmd
Public data in H5AD format Kfoury_CancerCell_2021.h5ad
Analysis code: Kfoury_CancerCell_2021.Rmd
Results: Kfoury_CancerCell_2021.html

Response to COVID-19 severity