-
Notifications
You must be signed in to change notification settings - Fork 0
/
recipe.yaml
71 lines (63 loc) · 1.3 KB
/
recipe.yaml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
package:
name: virusnet
version: 0.9.5
source:
path: virusnet/
build:
noarch: python
number: 0
# This is required to make R link correctly on Linux.
rpaths:
- lib/R/lib/
- lib/
requirements:
build:
- python 3.11
- gcc
- setuptools
- r-base 4.3.1
- r-hdf5r
- numpy
- r-keras
- r-remotes
- r-optparse
- r-zoo
- r-reticulate
- r-tfruns
- r-tfautograph
- r-mass
- r-mgcv
- h5py 3.9.0
- keras 2.12.0
- tensorflow-cpu 2.12.1
run:
- python >=3.11
- libgcc
- numpy
- r-base 4.3.1
- r-hdf5r
- r-keras
- r-optparse
- r-zoo
- r-purrr
- r-reticulate
- r-tfruns
- r-tfautograph
- r-mass
- r-mgcv
- r-futile.logger
- h5py 3.9.0
- keras 2.12.0
- tensorflow-cpu 2.12.1
test:
commands:
- virusnet --help
- R --vanilla -e "library(keras)"
- R --vanilla -e "library(deepG)"
about:
home: https://github.com/genomenet/virusnet
license: MIT
summary: A package for classifying virus using deep learning models.
description: |
VirusNet is a package that uses machine learning models to classify virus genus based on genomic sequences.
The model has been trained on high quality genomes from the International Committee on Taxonomy of Viruses (ICTV).