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mutspec_split.md

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MutSpec-Split (optional)

Split list of variants by sample ID.
This tool need to be used if you have a single file containing all your samples.

Input format

A tab delimited text file, with a column containing the samples ids.

Output

A folder containing tab delimited text files for each samples present in the input file.

Usage

perl mutspecSplit.pl --file filename --column index

List of parameters:

Parameter Description
--file Input file to split
--column Column number containing the samples ids (start to count from 1)
--help Print help message