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pyproject.toml.rej
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pyproject.toml.rej
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diff a/pyproject.toml b/pyproject.toml (rejected hunks)
@@ -7,7 +7,7 @@ name = "sobolev_alignment"
version = "0.0.1"
description = "Sobolev alignment of deep probabilistic models for comparing single cell profiles"
readme = "README.md"
-requires-python = ">=3.8"
+requires-python = ">=3.10"
license = {file = "LICENSE"}
authors = [
{name = "Soufiane Mourragui"},
@@ -21,30 +21,31 @@ urls.Home-page = "https://github.com/saroudant/sobolev_alignment"
dependencies = [
"anndata",
# for debug logging (referenced from the issue template)
- "session-info"
+ "session-info",
]
[project.optional-dependencies]
dev = [
- # CLI for bumping the version number
- "bump2version",
"pre-commit",
- "twine>=4.0.2"
+ "twine>=4.0.2",
]
doc = [
+ "docutils>=0.8,!=0.18.*,!=0.19.*",
"sphinx>=4",
"sphinx-book-theme>=1.0.0",
- "myst-nb",
+ "myst-nb>=1.1.0",
"sphinxcontrib-bibtex>=1.0.0",
"sphinx-autodoc-typehints",
+ "sphinxext-opengraph",
# For notebooks
"ipykernel",
"ipython",
"sphinx-copybutton",
+ "pandas",
]
test = [
"pytest",
- "pytest-cov",
+ "coverage",
]
[tool.coverage.run]