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Changelog

Version 1.3.0 (X.X.2018)

Features:

  • Raise exceptions when necessary subworkflows are not found.
  • Added loadings and spatial_maps for ICA result checks in nitap.

Changes:

  • Change the name of the rbvpvc node to pvc. Remember to change this in your config file!

Version 1.2.0 (21.09.2018)

Features:

  • Change configuration variable name from anat2fmri to fmri2mni.

Bugfixes:

  • I am still struggling with pipenv, trying a new approach: add get_requirements_from_pipfile in setup.py.

Version 1.1.2 (16.04.2018)

Features:

  • Add --extra parameter to nitap motion for extra subject metadata.
  • Bump nipype version to 1.0.2. Few fixes included.

Version 1.1.1 (08.03.2018)

Bugfixes:

  • Fix wrong import in cli/cli.py file.
  • Fix bugs in nitap plot command.

Version 1.1.0 (01.03.2018)

Features:

  • Add nitap CLI with plot and motion subcommands.

Docs:

  • Added a new section for the command line interface.

Code changes:

  • Changed all import paths to absolute paths.
  • Line width changed to 120.
  • Many code style changes towards automatised lint checks.

Version 1.0.1

  • Bug fix: some wrong import names with the module name change.
  • Bug fix: added missing requirements.

Version 1.0.0

  • API break: Change module name from pypes to neuro_pypes.
  • Documentation update.

Version 0.3.5

  • Fix connection naming in the fMRI pipeline atlas output.

Version 0.3.4

  • Fix connection naming in the fMRI pipeline atlas output.

Version 0.3.3

  • Fix output renaming in SPM+DiReCT pipeline.

  • Add black_bg parameter to multi slices plotting functions.

  • Add motion_stats_sheet to fmri utils.

  • General fix on import ordering which was raising errors from new Nipype.

Version 0.3.2

  • Add atlas warping to fMRI pipeline.

  • Fixes in fMRI pipeline.

Version 0.3 - 0.3.1

  • Add motion statistics measures in DTI pipeline.

  • Improve documentation.

  • Add SPM+DiReCT option to anatomical preprocessing.

  • Add invoke examples in tasks.py.

  • Style and bug fixes.

  • Fix imports for latest nipype version.

  • Add plot_ortho_slices function to nilearn interface.

Version 0.2.0 - 0.2.1

  • Add mkdocs documentation and readthedocs setup.

  • Add registration options for PET and fMRI. Add options for this in config.

  • Add group template for fMRI and PET pipelines.

  • Add brain_mask output to anatomical MR pipeline.

  • Rename/re-structure fMRI pipeline and files.

  • Improve PET output file namings.

  • Add settings for Camino in config.

  • Fix bug in _get_n_slices in slicetime_params.

  • Bug fixes.