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Exception while processing: Sequence contains no elements
Stack trace: MSPathFinderT.Program.ProcessFiles-:-InformedProteomics.TopDown.Execution.IcTopDownLauncher.RunSearch-:-InformedProteomics.TopDown.Execution.MzidResultsWriter.WriteResultsToMzid-:-InformedProteomics.TopDown.Execution.MzidResultsWriter.CreateMzidSettings-:-System.Linq.Enumerable.First[TSource]
The text was updated successfully, but these errors were encountered:
Hi, all.
I have reproduced a problem when I run the 1.1.8305 release on my test file.
My script for execution looks like this:
(This RAW file isn't public, but any of the experiments from PXD019247 would probably be a fine replacement for it.)
My IP-PTMs.txt file looks like this:
The error output looks like the following:
Calculating spectral E-values for target-spectrum matches
Estimated matched sequences: 673
Processing, 0 proteins done, 0.0% complete, 1.4 sec elapsed
Processing, 54 proteins done, 8.0% complete, 17.2 sec elapsed
Processing, 104 proteins done, 15.5% complete, 32.9 sec elapsed
Processing, 152 proteins done, 22.6% complete, 48.0 sec elapsed
Processing, 195 proteins done, 29.0% complete, 63.0 sec elapsed
Processing, 243 proteins done, 36.1% complete, 78.2 sec elapsed
Processing, 294 proteins done, 43.7% complete, 94.1 sec elapsed
Processing, 341 proteins done, 50.7% complete, 109.4 sec elapsed
Processing, 434 proteins done, 64.5% complete, 140.7 sec elapsed
Processing, 504 proteins done, 74.9% complete, 170.8 sec elapsed
Processing, 572 proteins done, 85.0% complete, 200.8 sec elapsed
Processing, 646 proteins done, 96.0% complete, 231.0 sec elapsed
Total Progress: 53.33%, 0d 0h 5.00m elapsed, Current Task: Calculating spectral E-values for target-spectrum matches, estimated remaining: 0d 0h 4.37m
Target-spectrum match E-value calculation elapsed Time: 262.8 sec
Exception while processing: Sequence contains no elements
Stack trace:
MSPathFinderT.Program.ProcessFiles
InformedProteomics.TopDown.Execution.IcTopDownLauncher.RunSearch
InformedProteomics.TopDown.Execution.MzidResultsWriter.WriteResultsToMzid
InformedProteomics.TopDown.Execution.MzidResultsWriter.CreateMzidSettings
System.Linq.Enumerable.First[TSource]
Exception while processing: Sequence contains no elements
Stack trace: MSPathFinderT.Program.ProcessFiles-:-InformedProteomics.TopDown.Execution.IcTopDownLauncher.RunSearch-:-InformedProteomics.TopDown.Execution.MzidResultsWriter.WriteResultsToMzid-:-InformedProteomics.TopDown.Execution.MzidResultsWriter.CreateMzidSettings-:-System.Linq.Enumerable.First[TSource]
The text was updated successfully, but these errors were encountered: