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Not able to build the Dockerfile dexseq/v1.30.0/Dockerfile:
Collecting pysam
Downloading https://files.pythonhosted.org/packages/25/7e/098753acbdac54ace0c6dc1f8a74b54c8028ab73fb027f6a4215487d1fea/pysam-0.15.4.tar.gz (1.6MB)
Complete output from command python setup.py egg_info:
# pysam: no cython available - using pre-compiled C
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-build-mVBXzi/pysam/setup.py", line 193, in <module>
.format(fn))
ValueError: no cython installed, but can not find pysam/libchtslib.c.Make sure that cython is installed when building from the repository
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-build-mVBXzi/pysam/
The command '/bin/sh -c apt-get update && apt-get install -y --no-install-recommends python-dev python-pip && pip install setuptools && pip install wheel && pip install pysam && pip install HTSeq && apt-get autoremove && rm -rf /var/lib/apt/lists/*' returned a non-zero code: 1
Not able to build the Dockerfile
dexseq/v1.30.0/Dockerfile
:See GitHub Actions run for more info: https://github.com/RTIInternational/biocloud_docker_tools/runs/465555645?check_suite_focus=true
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