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Allow PDB sequences in alignments #38

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kalvari opened this issue Aug 5, 2019 · 0 comments
Open

Allow PDB sequences in alignments #38

kalvari opened this issue Aug 5, 2019 · 0 comments
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@kalvari
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kalvari commented Aug 5, 2019

The new rfci-md5 code currently only allows a sequence to exist in GenBank, RNAcentral or Rfamseq. The code needs to be expanded in order to allow PDB sequences in SEED alignments too. For examlpe, this improvement will enable the building of the sgRNA family with RNAcentral accession: URS0000B21DDC with PDB sequences in the SEED alignment.
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