image_specs.json

{
  "pkg_manager": "apt",
  "instructions": [
    ["base", "debian:stretch"],
    ["mrtrix3", {"version": "3.0.0"}],
    ["ants", {"version": "2.3.1"}],
    ["fsl", {"version": "6.0.3"}],
    ["miniconda",
      {"use_env": "base",
        "conda_install": ["python", "pip",  "nipype", "nibabel"],
        "pip_install": ["pybids", "fastcore", "nilearn", "pipetography==0.3.12"]
      }],
    ["install", ["git", "ssh", "tar", "gzip", "ca-certificates", "fsl-first-data"]],
    ["run", "ldconfig"]
  ]
}