Hi. I failed to build GATK4.

[jdjdj0202]

Hi. I failed to build GATK4.

I am a very beginner of bioinformatics and data science.
I am using google VM ubuntu.
I downloaded gatk-4.4.0.0.

Step by step, I tried to build GATK4. (https://github.com/broadinstitute/gatk/blob/master/README.md#building)

I made a gitclone using
wget https://github.com/broadinstitute/gatk

and entered gatk folder.
there was a gradlew.
and I entered
./gradlew bundle
or
./gradlew

but it failed to build GATK4 with following errors.

====================================
OpenJDK 64-Bit Server VM warning: Insufficient space for shared memory file:
30934
Try using the -Djava.io.tmpdir= option to select an alternate temp location.

FAILURE: Build failed with an exception.

• What went wrong:
  Gradle could not start your build.

Cannot create service of type DependencyLockingHandler using method DefaultDependencyManagementServices$DependencyResolutionScopeServices.createDependencyLockingHandler() as there is a problem with parameter #2 of type ConfigurationContainerInternal.
Cannot create service of type ConfigurationContainerInternal using method DefaultDependencyManagementServices$DependencyResolutionScopeServices.createConfigurationContainer() as there is a problem with parameter #13 of type DefaultConfigurationFactory.
> Cannot create service of type DefaultConfigurationFactory using DefaultConfigurationFactory constructor as there is a problem with parameter #2 of type ConfigurationResolver.
> Cannot create service of type ConfigurationResolver using method DefaultDependencyManagementServices$DependencyResolutionScopeServices.createDependencyResolver() as there is a problem with parameter #1 of type ArtifactDependencyResolver.
> Cannot create service of type ArtifactDependencyResolver using method DependencyManagementBuildScopeServices.createArtifactDependencyResolver() as there is a problem with parameter #4 of type List.
> Could not create service of type VersionControlRepositoryConnectionFactory using VersionControlBuildSessionServices.createVersionControlSystemFactory().
> Failed to create parent directory '/home/jdjdj0202/gatk/.gradle' when creating directory '/home/jdjdj0202/gatk/.gradle/vcs-1'

• Try:

Run with --stacktrace option to get the stack trace.
Run with --info or --debug option to get more log output.
Run with --scan to get full insights.

• Get more help at https://help.gradle.org

BUILD FAILED in 754ms

FAILURE: Build failed with an exception.

• What went wrong:
  Could not update /home/jdjdj0202/gatk/.gradle/7.5.1/fileChanges/last-build.bin

/home/jdjdj0202/gatk/.gradle/7.5.1/fileChanges/last-build.bin (No such file or directory)

• Try:

Run with --stacktrace option to get the stack trace.
Run with --info or --debug option to get more log output.
Run with --scan to get full insights.

• Get more help at https://help.gradle.org

BUILD FAILED in 761ms

How can I build GATK4?

Thanks a lot.

[jdjdj0202]

I solved the problem by adding more storage. Thanks.