snakemake temp file location

[yuuuuzhang]

Hi,

I am wondering is there any way that we can specify the snakemake temp file location when running your pipeline? My default path for these files does not have enough space and it always gave me error of disk quota exceeded:

Traceback (most recent call last):
File ".../site-packages/snakemake/init.py", line 610, in snakemake
workflow = Workflow(
File ".../site-packages/snakemake/workflow.py", line 235, in init
self._sourcecache = SourceCache()
File ".../site-packages/snakemake/sourcecache.py", line 357, in init
self.runtime_cache = tempfile.TemporaryDirectory(dir=runtime_cache_parent)
File ".../tempfile.py", line 780, in init
self.name = mkdtemp(suffix, prefix, dir)
File ".../tempfile.py", line 358, in mkdtemp
_os.mkdir(file, 0o700)
OSError: [Errno 122] Disk quota exceeded: '/home/yzhang/.cache/snakemake/snakemake/source-cache/runtime-cache/tmp5v2aqbyx'