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mkdocs.yml
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mkdocs.yml
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site_name: stemflow
site_description: 'A package for Adaptive Spatio-Temporal Model (AdaSTEM) in python.'
repo_name: 'chenyangkang/stemflow'
repo_url: 'https://github.com/chenyangkang/stemflow'
site_url: https://chenyangkag.github.io/stemflow/
use_directory_urls: false
theme:
name: material
icon:
repo: 'fontawesome/brands/github'
features:
- toc.follow
# - toc.integrate
- navigation.top
- search.suggest
- search.highlight
- content.tabs.link
- content.code.annotation
- content.code.copy
- search.share
- navigation.indexes
language: en
palette:
# Palette toggle for light mode
- scheme: default
accent: light green
primary: green
toggle:
icon: material/brightness-7
name: Switch to dark mode
# Palette toggle for dark mode
- scheme: slate
accent: light green
primary: black
toggle:
icon: material/brightness-4
name: Switch to light mode
font:
text: Roboto
logo: assets/logo.png
favicon: assets/logo.png
plugins:
- social
- mkdocs-jupyter
- mkdocstrings:
handlers:
python:
options:
# inherited_members: true
docstring_style: google
docstring_section_style: list
# show_object_full_path: true
# show_root_full_path: true
extra:
social:
- icon: fontawesome/brands/github-alt
link: https://github.com/chenyangkang
# - icon: fontawesome/brands/twitter
# link: https://twitter.com/TheJamesWillett
# - icon: fontawesome/brands/linkedin
# link: https://www.linkedin.com/in/willettjames/
analytics:
provider: google
property: G-LT28RB77G3
nav:
- Home: index.md
- 'A Brief Introduction': A_brief_introduction/A_brief_introduction.md
- Examples:
- 'AdaSTEM demo': Examples/01.AdaSTEM_demo.ipynb
- 'SphereAdaSTEM demo': Examples/04.SphereAdaSTEM_demo.ipynb
- 'Learning curve analysis': Examples/02.AdaSTEM_learning_curve_analysis.ipynb
- 'Maxent as base model': Examples/03.Binding_with_Maxent.ipynb
- 'Using hurdle model in AdaSTEM': Examples/05.Hurdle_in_ada_or_ada_in_hurdle.ipynb
- 'Base model choices': Examples/06.Base_model_choices.ipynb
- 'Optimizing stixel size': Examples/07.Optimizing_stixel_size.ipynb
- Tips:
- 'Tips for spatiotemporal indexing': Tips/Tips_for_spatiotemporal_indexing.md
- 'Tips for data types': Tips/Tips_for_data_types.md
- 'Tips for different tasks': Tips/Tips_for_different_tasks.md
- API Documentation:
- stemflow.model:
- 'AdaSTEM': API_Documentation/model/stemflow.model.AdaSTEM.md
- 'SphereAdaSTEM': API_Documentation/model/stemflow.model.SphereAdaSTEM.md
- 'STEM': API_Documentation/model/stemflow.model.STEM.md
- 'static_func_AdaSTEM': API_Documentation/model/stemflow.model.static_func_AdaSTEM.md
- 'Hurdle': API_Documentation/model/stemflow.model.Hurdle.md
- 'dummy_model': API_Documentation/model/stemflow.model.dummy_model.md
- 'special_hurdle': API_Documentation/model/stemflow.model.special_hurdle.md
- stemflow.gridding:
- 'Q_blocks': API_Documentation/gridding/stemflow.gridding.Q_blocks.md
- 'QTree': API_Documentation/gridding/stemflow.gridding.QTree.md
- 'Sphere_QTree': API_Documentation/gridding/stemflow.gridding.Sphere_QTree.md
- 'QuadGrid': API_Documentation/gridding/stemflow.gridding.QuadGrid.md
- stemflow.utils:
- 'jitterrotation':
- 'jitterrotator': API_Documentation/utils/jitterrotation/stemflow.utils.jitterrotation.jitterrotator.md
- 'sphere':
- 'coordinate_transform': API_Documentation/utils/sphere/stemflow.utils.sphere.coordinate_transform.md
- 'discriminant_formula': API_Documentation/utils/sphere/stemflow.utils.sphere.discriminant_formula.md
- 'distance': API_Documentation/utils/sphere/stemflow.utils.sphere.distance.md
- 'Icosahedron': API_Documentation/utils/sphere/stemflow.utils.sphere.Icosahedron.md
- 'quadtree': API_Documentation/utils/stemflow.utils.quadtree.md
- 'sphere_quadtree': API_Documentation/utils/stemflow.utils.sphere_quadtree.md
- 'plot_gif': API_Documentation/utils/stemflow.utils.plot_gif.md
- 'generate_soft_colors': API_Documentation/utils/stemflow.utils.generate_soft_colors.md
- 'validation': API_Documentation/utils/stemflow.utils.validation.md
- 'wrapper': API_Documentation/utils/stemflow.utils.wrapper.md
- stemflow.model_selection: API_Documentation/stemflow.model_selection.md
- Fun Visualization:
- 'Global Bird Diversity': Fun_Visualization/Global_Bird_Shannon_H_Index.md
- 'Ruby-crowned_Kinglet': Fun_Visualization/Ruby-crowned_Kinglet_2020.md
- 'Global NDVI': Fun_Visualization/Global_NDVI.md
- 'Global Mean Temperature': Fun_Visualization/Global_Mean_Temperature_2020.md
- Contributing: CONTRIBUTING.md
- 'Code of conduct': CODE_OF_CONDUCT.md
# - Download mini data: mini_data/mini_data.csv
markdown_extensions:
- tables
# - toc:
# toc_depth : "1-1"
- pymdownx.highlight:
anchor_linenums: true
- pymdownx.inlinehilite
- pymdownx.snippets
- admonition
- pymdownx.arithmatex:
generic: true
- footnotes
- pymdownx.details
- pymdownx.superfences
- pymdownx.mark
- attr_list
- pymdownx.emoji
# emoji_index: !!python/name:materialx.emoji.twemoji
# emoji_generator: !!python/name:materialx.emoji.to_svg
- pymdownx.critic
- pymdownx.caret
- pymdownx.keys
- pymdownx.tilde
# extra_css:
# - css/extra.css
copyright: |
© 2024 <a href="https://github.com/chenyangkang" target="_blank" rel="noopener">Yangkang Chen</a>