-
Notifications
You must be signed in to change notification settings - Fork 0
/
seed_sintax.csv
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 7 columns, instead of 8 in line 1.
30 lines (30 loc) · 8.86 KB
/
seed_sintax.csv
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Cluster_5 1:N:0:ACCAGG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Brevibacteriaceae(1.0000),g:Brevibacterium(1.0000),s:Brevibacterium celere(0.4900) + d:Bacteria
Cluster_4 1:N:0:ACCAGG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Brevibacteriaceae(1.0000),g:Brevibacterium(1.0000),s:Brevibacterium aurantiacum(0.4800) + d:Bacteria,p:Actinobacteria
Cluster_2 1:N:0:CAACGA d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Enterobacteriales(1.0000),f:Enterobacteriaceae(1.0000),g:Hafnia(0.9600),s:Hafnia alvei(0.9600) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria
Cluster_6 1:N:0:ACCAGG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Dermabacteraceae(1.0000),g:Brachybacterium(1.0000),s:Brachybacterium alimentarium(0.5600) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Dermabacteraceae,g:Brachybacterium,s:Brachybacterium alimentarium
Cluster_1 1:N:0:CAACGA d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Streptococcaceae(1.0000),g:Lactococcus(1.0000),s:Lactococcus lactis(1.0000) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Streptococcaceae
Cluster_3 1:N:0:CAACGA d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Streptococcaceae(1.0000),g:Lactococcus(1.0000),s:Lactococcus chungangensis(0.7900) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales
Cluster_7 1:N:0:CAACGA d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Enterobacteriales(1.0000),f:Enterobacteriaceae(1.0000),g:Enterobacter(0.5900),s:Enterobacter ludwigii(0.2300) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria,o:Enterobacteriales,f:Enterobacteriaceae,g:Enterobacter
Cluster_10 1:N:0:CCTGCT d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Streptococcaceae(1.0000),g:Lactococcus(1.0000),s:Lactococcus lactis(0.6900) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Streptococcaceae,g:Lactococcus,s:Lactococcus lactis
Cluster_9 1:N:0:CCTGCT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Brevibacteriaceae(1.0000),g:Brevibacterium(1.0000),s:Brevibacterium senegalense(0.5800) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Brevibacteriaceae,g:Brevibacterium,s:Brevibacterium senegalense
Cluster_12 1:N:0:CAACGA d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Streptococcaceae(1.0000),g:Lactococcus(1.0000),s:Lactococcus lactis(0.3300) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Streptococcaceae,g:Lactococcus
Cluster_11 1:N:0:CAACGA d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Enterobacteriales(1.0000),f:Enterobacteriaceae(1.0000),g:Serratia(0.8000),s:Serratia proteamaculans(0.8000) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria,o:Enterobacteriales,f:Enterobacteriaceae,g:Serratia,s:Serratia proteamaculans
Cluster_13 1:N:0:CCTGCT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Dermabacteraceae(0.9900),g:Brachybacterium(0.9900),s:Brachybacterium alimentarium(0.3800) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Dermabacteraceae,g:Brachybacterium
Cluster_14 1:N:0:CCTGCT d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Bacillales(1.0000),f:Staphylococcaceae(1.0000),g:Staphylococcus(1.0000),s:Staphylococcus equorum(0.9400) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Bacillales,f:Staphylococcaceae,g:Staphylococcus,s:Staphylococcus equorum
Cluster_8 1:N:0:CCTGCT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Micrococcaceae(1.0000),g:Yaniella(0.9900),s:Yaniella halotolerans(0.9900) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Micrococcaceae,g:Yaniella,s:Yaniella halotolerans
Cluster_16 1:N:0:CATGAG d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Lactobacillaceae(1.0000),g:Lactobacillus(1.0000),s:Lactobacillus casei(0.9800) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Lactobacillaceae,g:Lactobacillus,s:Lactobacillus casei
Cluster_17 1:N:0:ACCAGG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Corynebacteriales(1.0000),f:Dietziaceae(0.9800),g:Dietzia(0.9800),s:Dietzia psychralcaliphila(0.6500) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Corynebacteriales,f:Dietziaceae,g:Dietzia,s:Dietzia psychralcaliphila
Cluster_19 1:N:0:GGATTC d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Pseudomonadales(1.0000),f:Moraxellaceae(1.0000),g:Acinetobacter(1.0000),s:Acinetobacter bereziniae(0.9500) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria,o:Pseudomonadales,f:Moraxellaceae,g:Acinetobacter,s:Acinetobacter bereziniae
Cluster_18 1:N:0:CCTGCT d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Enterobacteriales(1.0000),f:Enterobacteriaceae(1.0000),g:Yersinia(0.9200),s:Yersinia_Species(0.9000) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria,o:Enterobacteriales,f:Enterobacteriaceae,g:Yersinia,s:Yersinia_Species
Cluster_20 1:N:0:TTACTC d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Corynebacteriales(1.0000),f:Dietziaceae(0.8600),g:Dietzia(0.8600),s:Dietzia timorensis(0.8300) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Corynebacteriales,f:Dietziaceae,g:Dietzia,s:Dietzia timorensis
Cluster_21 1:N:0:AAATGT d:Bacteria(1.0000),p:Proteobacteria(1.0000),c:Gammaproteobacteria(1.0000),o:Enterobacteriales(1.0000),f:Enterobacteriaceae(1.0000),g:Shigella(0.9600),s:Shigella flexneri(0.9600) + d:Bacteria,p:Proteobacteria,c:Gammaproteobacteria,o:Enterobacteriales,f:Enterobacteriaceae,g:Shigella,s:Shigella flexneri
Cluster_22 1:N:0:CCTGCT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(0.9900),f:Dermabacteraceae(0.9600),g:Brachybacterium(0.9600),s:Brachybacterium conglomeratum(0.3400) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Dermabacteraceae,g:Brachybacterium
Cluster_23 1:N:0:AGCGGT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Streptosporangiales(0.9900),f:Nocardiopsaceae(0.9900),g:Nocardiopsis(0.7900),s:Nocardiopsis alkaliphila(0.4700) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Streptosporangiales,f:Nocardiopsaceae,g:Nocardiopsis
Cluster_24 1:N:0:CAGCGT d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Lactobacillaceae(1.0000),g:Lactobacillus(1.0000),s:Lactobacillus parabuchneri(0.7000) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Lactobacillaceae,g:Lactobacillus,s:Lactobacillus parabuchneri
Cluster_15 1:N:0:CATGAG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Dermabacteraceae(1.0000),g:Brachybacterium(1.0000),s:Brachybacterium tyrofermentans(0.6500) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Dermabacteraceae,g:Brachybacterium,s:Brachybacterium tyrofermentans
Cluster_25 1:N:0:ACCAGG d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Brevibacteriaceae(1.0000),g:Brevibacterium(1.0000),s:Brevibacterium celere(0.4200) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Brevibacteriaceae,g:Brevibacterium
Cluster_27 1:N:0:TTACTC d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Dermabacteraceae(0.9800),g:Brachybacterium(0.9800),s:Brachybacterium conglomeratum(0.5800) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Dermabacteraceae,g:Brachybacterium,s:Brachybacterium conglomeratum
Cluster_26 1:N:0:CCTGCT d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Enterococcaceae(1.0000),g:Enterococcus(1.0000),s:Enterococcus faecalis(0.9300) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Enterococcaceae,g:Enterococcus,s:Enterococcus faecalis
Cluster_29 1:N:0:ACCAGG d:Bacteria(1.0000),p:Firmicutes(1.0000),c:Bacilli(1.0000),o:Lactobacillales(1.0000),f:Enterococcaceae(1.0000),g:Enterococcus(1.0000),s:Enterococcus thailandicus(0.5200) + d:Bacteria,p:Firmicutes,c:Bacilli,o:Lactobacillales,f:Enterococcaceae,g:Enterococcus,s:Enterococcus thailandicus
Cluster_32 1:N:0:CATGAG d:Bacteria(1.0000),p:Actinobacteria(0.7900),c:Actinobacteria(0.7900),o:Micrococcales(0.7900),f:Brevibacteriaceae(0.7900),g:Brevibacterium(0.7700),s:Brevibacterium luteolum(0.3600) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Brevibacteriaceae,g:Brevibacterium
Cluster_31 1:N:0:CCTGCT d:Bacteria(1.0000),p:Actinobacteria(1.0000),c:Actinobacteria(1.0000),o:Micrococcales(1.0000),f:Brevibacteriaceae(1.0000),g:Brevibacterium(1.0000),s:Brevibacterium celere(0.5800) + d:Bacteria,p:Actinobacteria,c:Actinobacteria,o:Micrococcales,f:Brevibacteriaceae,g:Brevibacterium,s:Brevibacterium celere