Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

clarify output format (for nucleotide_p.ptc_n.btn_GSE_original.tsv) #9

Open
khl0798 opened this issue Mar 13, 2019 · 2 comments
Open

Comments

@khl0798
Copy link

khl0798 commented Mar 13, 2019

I add the -E parameter when I run the Defiant.
image

Generate a file named after ### nucleotide_p.ptc_n.btn_GSE_original.tsv, I want to know what these Positive integer mean, as indicated in the box.
image

image

@hhg7 Many thanks.

@khl0798
Copy link
Author

khl0798 commented Mar 14, 2019

by the way ,I am confused with the results;
Even though I tuned the parameters "-P 1 -c 1 -CpN 1 -d 1 " there was no DMR.
image
And I don't know what each column of this form means.
image

@hhg7
Copy link
Owner

hhg7 commented Mar 15, 2019

could you please provide a copy of your input file, 499/6 is impossible, every number should be in [0,1], this fraction is outside of that range

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants