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Deployments

Note

All deployment methods require the cns executable to available in this directory.

On Apple M1 and later versions, the cns executable should be compiled for the linux arm64 platform. On Intel or AMD processors the cns executable should be compiled for the linux amd64 platform.

The cns executable should have its execute bit set with chmod +x cns.

Methods

Versions

The webapp version is what is currently checked out.

Versions of bartender, haddock3, gdock and lightdock are defined in the start of the ./Dockerfile.bartenderhaddock3 file. A version can be a git tag, branch or commit hash. They can be overwritten during build with

docker compose -f <docker compose file> build --build-arg HADDOCK3_VERSION=v3.0.0-beta.5

Docker will not detect new commits to a branch, so it is recommended to use a commit hash.

Removal

To remove all users and jobs run the following command:

docker compose -f <docker compose file> down -v

Images

The Docker images are published on https://github.com/orgs/i-VRESSE/packages .

Each image has same set of tags:

  • main, build from HEAD of the main branch
  • <version>, build from that version tag
  • latest, build latest version tag
  • pr-<number>, build from that pull request

The images are avaliable for linux amd64 and linux arm64 platforms, but arm64 images are not build on pull requests.

When a pull request is closed, you are reminded in a comment to remove the images belonging to that pull request from the registry.

bartender image

Bartender web service with haddock3, lightdock, gdock executables.

Image does not contain real cns executable, downstream should bind or copy it to /opt/haddock3/bin/cns.

This image can be used to run the

  1. bartender web service, with bartender serve command
  2. bartender worker, with bartender perform command
  3. haddock3 restraints web service, with uvicorn --host 0.0.0.0 --port 5000 haddock.clis.restraints.webservice:app command

certmaker image

Generates a rsa private key (/certs/private_key.pem file) and public key (/certs/public_key.pem file) pair on startup.

haddock3-webapp image

Haddock3 web application image.