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NEWS.md

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Release 1.4-r122 (19 May 2023)

Notable changes:

  • Improvement: faster FASTX parsing (#123)

  • New feature: added the telo command to output telomere regions.

  • New feature: added the size command to count the number of sequences and the number of bases. Lighter and thus faster than comp.

  • New feature: added the hpc command to compress homopolymers in input sequences.

  • New feature: added the split command to split a large input file into multiple smaller files.

  • New feature: added the gap command to output non-ACGT regions in the input file.

  • New feature: added option -s to command subseq to support the strand field in BED. For the moment, this option does not work with other subseq options.

(1.4: 19 May 2023, r122)