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.travis.yml
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.travis.yml
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language: r
sudo: false
warnings_are_errors: false
cache: packages
bioc_required: true
bioc_packages:
- BiocCheck
after_script:
- ls -lah
- FILE=$(ls -1t *.tar.gz | head -n 1)
- Rscript -e "library(BiocCheck); BiocCheck(\"${FILE}\")"
addons:
apt:
sources:
- ubuntu-toolchain-r-test
packages:
- gcc-4.8
- g++-4.8
- libcurl4-openssl-dev
- libgsl-dev
notifications:
email:
on_success: change
on_failure: change
env:
global:
- R_BUILD_ARGS="--no-build-vignettes --no-manual --no-resave-data"
- R_CHECK_ARGS="--no-build-vignettes --no-manual --timings"
- R_CHECK_TIME="TRUE"
- R_CHECK_TESTS="TRUE"
- _R_CHECK_TIMINGS_="0"
- CXX="g++-4.8"
- CC="gcc-4.8"
r_packages:
- covr
after_success:
- Rscript -e 'library(covr); codecov()'