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VP4 in Seneca Valley virus results #71

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luque82 opened this issue Oct 9, 2023 · 0 comments
Open

VP4 in Seneca Valley virus results #71

luque82 opened this issue Oct 9, 2023 · 0 comments
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luque82 commented Oct 9, 2023

Seneca Valley virus (SVV) capsid: PDBid 3cji. In the pyCapsid analysis, the number of modes was increased to 800, reaching a correlation coefficient of CC = 0.64 between experimental and predicted B-factors. The predicted B-factor profile displayed larger fluctuations in a few small regions of about ~15 amino-acids, probably due to the presence of RNA in the capsids, which was not included in the PDB or in pyCapsid's model
+ Is the largest signal associated with the residues of VP4 (the minor capsid protein)?
@luque82 luque82 added the question Further information is requested label Oct 9, 2023
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