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Riptide context specific model quality and related questions #17

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hites77 opened this issue Sep 21, 2023 · 0 comments
Open

Riptide context specific model quality and related questions #17

hites77 opened this issue Sep 21, 2023 · 0 comments

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@hites77
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hites77 commented Sep 21, 2023

The GMM (gap filled) used for input in riptide was having memote score of 77% while after integrating transcriptomics data the score fall to 54%. Is this normal ? also the unbounded flux in default media shows negative value which become major cause of decline in model consistency score.
Also whether to supply draft metabolic model or gap-filled model in riptide ?
Does any further model validation is required on riptide generated model ?
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