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environment.yml
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environment.yml
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name: bioconda
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- awscli=1.18.21
- biopython=1.74
- blast=2.9.0
- bzip2=1.0.8
- cwl_runner=1.0
- cwltool=1.0.20190228155703
- entrez-direct=13.3
- font-ttf-dejavu-sans-mono=2.37
- font-ttf-inconsolata=2.001
- font-ttf-source-code-pro=2.030
- font-ttf-ubuntu=0.83
- fontconfig=2.13.1
- fonts-conda-forge=1
- git=2.23.0
- google-api-core=1.16.0
- google-auth=1.11.2
- google-cloud-core=1.3.0
- google-cloud-sdk=281.0.0
- google-cloud-storage=1.23.0
- google-resumable-media=0.5.0
- googleapis-common-protos=1.51.0
- imagemagick=7.0.9_27
- jupyter=1.0.0
- matplotlib=3.1.1
- mscorefonts=0.0.1
- ncbi-ngs-sdk=2.10.4
- networkx=2.3
- nodejs=12.3.0
- numpy=1.18.1
- pandas=0.25.0
- parallel=20200122
- python=3.7.6
- scipy=1.3.0
- seaborn=0.9.0
- statsmodels=0.11.1
- sra-tools=2.10.0
- transdecoder=5.5.0
- unzip=6.0
- wand=0.5.6
- xmltodict=0.12.0