Experimental code for performing spike sorting using a neural network.
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Updated
Apr 25, 2017 - Jupyter Notebook
Experimental code for performing spike sorting using a neural network.
Spikefinder submission
Material for the ENP course 2015
PKGBUILD of CaImAn for Archlinux
Code for submission of Speiser et al to spike-finder-challenge 2017
narci is an ontology for calcium imaging experiments.
Collection of LabView & Matlab tools for simultaneous calcium & fMRI measurements
Automated Cell Segmentation by Adaptive Thresholding (ACSAT)
A collection of functions that facilitate the analysis of experimental calcium imaging data.
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Decoding images from calcium recordings using data from stringer et al. 2018.
This is my toolbox for image processing and downstream analysis of calcium imaging data.
SamuROI - Structured analysis of multiple user-defined ROIs, an open source Python-based analysis environment for imaging data.
a Python toolbox for reproducible analysis and visualization of NeuroPhysiological data.
Data codes and analysis of the added buffer approach with beta-escin perforated patch
Course material for the ENP 2017 and 2018 lectures
Spatial memory in health and disease: Hippocampal stability deficits in the Df(16)A+/- mouse model of schizophrenia
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