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Aug 22, 2018 - Java
dna-alignment
Here are 17 public repositories matching this topic...
A couple of assignments I did for a course in computational (molecular) biology @ University of Warsaw
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Nov 18, 2018 - Jupyter Notebook
Import and export .SAM (Sequence Alignment/Map format) files in Mathematica
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Feb 14, 2019 - Mathematica
Parallel-DNA-Sequence-Alignment
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Dec 5, 2019 - Cuda
web application for DNA comparison, alignment and phylogenetic tree. Released on 2020.
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Dec 20, 2020 - JavaScript
A pure python lazy BAM parser
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Jun 1, 2021 - Jupyter Notebook
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Dec 10, 2021 - Shell
Guide to download NCBI Bioproject sequencing data and script to generate DNA short read alignment dataset from the data.
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Apr 29, 2022 - Shell
G-BLASTN is a GPU-accelerated nucleotide alignment tool based on the widely used NCBI-BLAST.
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Oct 20, 2022 - C++
This is a repo for the algorithms solutions towards the DNA alignment problem. I adopt two ways to solve the problem: dp and Divide n' Conquer
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Dec 9, 2022 - C++
BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool
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Mar 31, 2023 - Python
DNA barcoding analysis pipeline
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Jul 20, 2023 - Python
DNAssist: the integrated editing and analysis of molecular biology sequences in Windows
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Aug 9, 2023 - C++
The project is based on the paper Sequence Alignment by Cross-Correlation and bridges the gap between the knowledge and an useful implementation.
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Oct 10, 2023 - Python
Bowtie2 v2.5.2 Dockerfile Native for Apple M1+ Silicon (ARM64) and Intel/AMD (x86_64) Containers
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Dec 28, 2023 - Dockerfile
A program that enables biologists to score the similarity between DNA sequences and view the aligned portions
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Jan 1, 2024 - Python
This is a bunch of programs I created in the 2020 Intermediate Coding For Medicine Course. No Stealing.
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Jul 2, 2024 - Python
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