Mutational Signatue Analysis using R
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Updated
Apr 23, 2020 - R
Mutational Signatue Analysis using R
Sequencing Data Analysis
Study plan for learning Health Data Science(HDS)
Hormone Therapy Decision Support System for Breast Cancer
Python for Bioinformatics
Classify enzymes with geomic sequence using spark-ML
My personal genomic data science project
Variant barcoding pipeline using single nucleotide polymorphisms (SNPs) for the generation of M. orygis standardised markers for diagnostic and epidemiological use.
A repository containing all the file projects that I have for the Bioinformatics 5 (COMP 4312d) course.
Introduction to Genomic Data Science with R
GQuery is a software tool for rapidly querying large numbers of bgzip compressed, tabix indexed genomic data files e.g. vcf, maf, bed, bedGraph, etc. from multiple species with different genome builds without the need to develop, debug, and maintain custom file parsers. Search for particular germline or somatic mutations, copy number changes, di…
The GitHub repository for genomic data science is a collection of resources, tools, and code snippets for analyzing and interpreting genomic data.
GETS: a Genomic Tree based Sparse solver. This package accompanies an article to be published in the forthcoming Birkhäuser-ANHA book "Explorations in the Mathematics of Data Science" --- "A genomic tree based sparse solver" by Timothy A. Davis and Srinivas Subramanian.
Tool to calculate a "k-mer pattern partition" from position specific k-mer counts.
Ortholog/homolog mapping for Geneweaver
Documentation site for the Geneweaver project.
The core library for GeneWeaver projects.
The GeneWeaver database interaction code.
Overture.bio website, based on Gatsby static site generator
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