Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
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Updated
Sep 10, 2024 - Visual Basic .NET
Data toolkits for processing NMR, MALDI MSI, MALDI single cell, Raman Spectroscopy, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
Data Mining and Analysis of Lipidomics datasets in R
Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)
metaX: a flexible and comprehensive software for processing omics data.
Maven GUI: Metabolomics Analysis and Visualization Engine
pyQms, generalized, fast and accurate mass spectrometry data quantification
LipidHunter is capable to perform bottom up identification of lipids from LC-MS/MS and shotgun lipidomics data by resembling a workflow of manual spectra annotation. LipidHunter generates interactive HTML output with its unique six-panel-image, which provides an easy way to review, store, and share the identification results.
LipidLynxX provides the possibility to convert, cross-match, and link various lipid annotations to the tools supporting lipid ontology, pathway, and network analysis aiming systems-wide integration and functional annotation of lipidome dynamics in health and disease.
Guide to processing raw LCMS metabolomic and lipidomic data using MS-DIAL, followed by data pre-processing and secondary annotation (of metabolites) in R.
Galaxy tools for Python package DIMSpy: data processing of Direct-Infusion Mass Spectrometry-based metabolomics and lipidomics data
A collection of awesome lipidomics tools and resources
A DMS Shotgun Lipidomics Workflow Application to Facilitate High-Throughput, Comprehensive Lipidomics
Python module for lipidomics LC MS/MS data analysis
Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Quantify lipids using a feature table and internal standards table
Functions and a Shiny app to correct class-based separation LC-MRM-MS lipidomics data for isotopic interferences
epiLipidome Identifier and Optimized Nomenclature
Goslin is the Grammar on succinct lipid nomenclature.
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