Contains data and R code for paper on occupancy analyses of Brown bear habitat use in the Pyrenees
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Updated
May 8, 2017 - R
Contains data and R code for paper on occupancy analyses of Brown bear habitat use in the Pyrenees
Illustrate how to fit dynamic occupancy model in ADMB. Benchmarking with Unmarked and JAGS.
Illustrate how to fit dynamic occupancy model in TMB. Benchmarking vs. ADMB, Unmarked and JAGS.
Supplementary material of the article "Disentangling the effects of anthropogenic and habitat factors on the distribution of an invasive primate" by Morais-Jr et al.
This repository contains all the materials needed to reproduce Roth et. al (2017): Functional ecology and imperfect detection of species. Methods in Ecology and Evolution.
Occupancy model that allows for staggered arrival and departure times to analyse corncrake calling sites.
Code to fit a multistate occupancy model with uncertainty in Jags
Calculate bias in occupancy estimate for static model
Simulate data and fit 2-species occupancy model à la Rota et al. (2016) w/ Unmarked
Inferring poaching with multispecies dynamic occupancy models and hidden Markov models
Includes the R code and the supporting materials for our paper "Using machine learning to identify nontraditional spatial dependence in occupancy data"
A package for fast bayesian analysis of single season spatial occupancy models.
Slides of a talk on deep learning, false negatives/positives and predator-prey interactions with R.
Simulate dynamic environments and LiDAR observations
Data and code for a paper on Med monk seal distribution in Greece
Modelos de ocupación para mamíferos en norte de Santander
Single-species, dynamic occupancy models to investigate seasonal habitat-use patterns
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