Faster, better, smarter ecological niche modeling and species distribution modeling

Rossman R., Yackulic C., Saunders S.P., Reid J., Davis R., and Zipkin E.F. 2016. Dynamic N-occupancy models: estimating demographic rates and local abundances from detection-nondetection data. Ecology. 97: 3300-3307.

Simple layers for species distribution modeling and bioclimatic data

Work with species distributions in Julia

ABMI amphibian species models

🌳 🌍 📓 Code and data for Tagliari et al. 2021, Not all species will migrate poleward as the climate warms: the case of the seven baobab species in Madagascar. Global Change Biology.

ABMI mammal species density estimation and habitat modeling

All-in-one model based custom predictions

Science Centre Development Website

📦 🌎 ⛰️ ☀️ ☁️ 🌱 Get climatic and other environmental variables

SDM based on the land facet layer.

Alberta bird models using ABMI+BAM+BBS data

Application of Taylor Diagrams to Ecological Niche Models/Species Distribution Models

A SDM pipeline implemented in R with {targets}

Sipe H, IN Keren, and SJ Converse. 2023. Integrating community science and agency-collected monitoring data to expand monitoring capacity at large spatial scales. Ecology and Evolution.

Generates null models for species occurrence data

The script provides a guideline to prepare data for the estimation of distribution range, create and download NDVI data, generate environmental variables from Digital Elevation Models, NDVI datasets and Climate-EU model, calculate landscape metrics for a species’ habitat using binary habitat maps, conduct LASSO and Elastic Net and run GLMs.