Less-wrong single-file Numba-accelerated Python implementation of Gotoh affine gap penalty extensions for the Needleman–Wunsch, Smith-Waterman, and Levenshtein algorithms for sequence alignment
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Updated
Aug 14, 2024 - Python
Less-wrong single-file Numba-accelerated Python implementation of Gotoh affine gap penalty extensions for the Needleman–Wunsch, Smith-Waterman, and Levenshtein algorithms for sequence alignment
Find parts of long text or data, allowing for some changes/typos.
A convenient implementation of the Aho-Corasick algorithm to find multiple search patterns
Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)
KMP (Knuth-Morris-Pratt) String Search Algorithm
IDAPython plugin for finding function strings recursively
➡他们是怎么把 KMP 算法讲得这么复杂的?为了降低搜索算法的学习门槛,我设计了一种带有二分法思维的搜索算法 Jitter Search。
This code is a way to find text with unknown encodings
Package pyalgs implements algorithms in Robert Sedgwick's Algorithms using Python
Python library for checking string consistency between files.
A small tool to find a string in a directory
KMP string search algorithm implemented in Python
A concise yet efficient implementation for the statistics of each tag's set of key phrases over input lines in Python.
Efficiently search the most similar strings against the query in Python.
Command line utility to search data for matching patterns
Fast(ish) string similarity for one vs many comparisons.
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