RNA-seq code with Bowtie alignment and generating strain-specific counts using Emase
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Updated
Apr 4, 2022 - HTML
RNA-seq code with Bowtie alignment and generating strain-specific counts using Emase
Bulk Rna-seq Analysis
The repository contain directories of projects done during the bioinformatics degree program
Whole Exome Sequencing end-to-end pipeline. Starting from whole exome fastq files: Data QC, Adapter Trimming, Reference Genome Alignment, SAM/BAM Validation, Data Recalibration and Variant Calling.
A comprehensive workflow for de novo assembly of whole-genome shotgun sequencing data using Velvet, followed by BLAST searches to analyze assembled contigs.
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