An example script of how to download WGBS data from SLIMS, check md5sums, merge lanes, and submit a project to CpG_Me
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Updated
Feb 28, 2020 - Shell
An example script of how to download WGBS data from SLIMS, check md5sums, merge lanes, and submit a project to CpG_Me
Differential methylation: Easy, Fast, Identification and ANnoTation
A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)
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