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LICENSE file and tagged release for distribution #1

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npavlovikj opened this issue Oct 6, 2018 · 2 comments
Open

LICENSE file and tagged release for distribution #1

npavlovikj opened this issue Oct 6, 2018 · 2 comments

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@npavlovikj
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Hi,

I am part of the Bioconda community, https://bioconda.github.io/, and would like to create a conda package for "fGWAS" for easier distribution and installation. However, in order to do this, the package needs to have a LICENSE file and a tagged release.
Can you please add these requirements so I can create the conda package?

Thank you,
Natasha

@wzhy2000
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I have added the license file and tagged release, please let me know how to help you create the conda package.

@npavlovikj
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Hi @wzhy2000 ,

Thank you so much for your prompt reply!
The r-fgwas package for Linux and OSX is now available in the bioconda channel, https://anaconda.org/bioconda/r-fgwas.
To install fGWAS using conda, all you need to do is type:
conda install -c bioconda r-fgwas

All the dependencies such as R, minpack.lm, snpStats, mvtnorm, and parallel are already included in the package, so the users just need to create the conda environment and start using fGWAS.

On a side note, while testing "fGWAS", I noticed that in the "Usage Instructions" in the README, you sometimes use "obj", and sometime "obj2". For the examples to work, the same name , e.g. "obj" should be used, so you may update the instructions to keep the consistency.

I hope you and the users find the fGWAS conda package useful, and please let me know if there are any issues with it.
Also, thank you so much for developing fGWAS!

Thank you,
Natasha

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