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taxodium.proto
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taxodium.proto
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syntax = "proto3";
package Taxodium;
message MutationList{
repeated int32 mutation = 1;
}
message MetadataSingleValuePerNode{
string metadata_name = 1;
string metadata_title = 2;
repeated string mapping = 3;
repeated int32 node_values = 4;
}
message AllNodeData {
repeated string names = 1;
repeated float x = 2;
repeated float y = 3;
repeated int32 countries = 4;//Deprecated: DO NOT USE (use metadata_singles)
repeated int32 dates = 7;
repeated int32 lineages = 5;//Deprecated: DO NOT USE (use metadata_singles)
repeated MutationList mutations = 6;
repeated int32 parents = 8;
repeated string genbanks = 9;
repeated int32 epi_isl_numbers = 10;
repeated int32 num_tips = 11;
repeated MetadataSingleValuePerNode metadata_singles = 12;
}
message AllData{
AllNodeData node_data= 1;
repeated string country_mapping = 2;//Deprecated: DO NOT USE (use metadata_singles above)
repeated string lineage_mapping = 3; //Deprecated: DO NOT USE (use metadata_singles above)
repeated string mutation_mapping = 4;
repeated string date_mapping = 5;
string tree_description = 6;
string tree_title = 7;
}