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张老师您好, 我在尝试默认安装SCP时,默认是安装的SeuratV5,而导致无法运行,因此调试后将Seurat降为4.4.0,SeuratObject保持V5,可以运行CellQC,但在进行Standard_SCP时,输出的文件中缺少了“Celltpye”,"SubCelltype"等文件。请问这应该如何解决呢 谢谢。
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我也想知道,SCP什么时候可以兼容Seurat V5
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同样的问题,手动降级seurat5以及依赖包非常复杂,且仍然会在一些函数遇到不可预料的bug
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张老师您好,
![微信图片_20240112231726](https://private-user-images.githubusercontent.com/146324314/296281967-22712f90-cc7b-4180-9a59-c8e6d056041a.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJnaXRodWIuY29tIiwiYXVkIjoicmF3LmdpdGh1YnVzZXJjb250ZW50LmNvbSIsImtleSI6ImtleTUiLCJleHAiOjE3MjU2NzYzMDYsIm5iZiI6MTcyNTY3NjAwNiwicGF0aCI6Ii8xNDYzMjQzMTQvMjk2MjgxOTY3LTIyNzEyZjkwLWNjN2ItNDE4MC05YTU5LWM4ZTZkMDU2MDQxYS5wbmc_WC1BbXotQWxnb3JpdGhtPUFXUzQtSE1BQy1TSEEyNTYmWC1BbXotQ3JlZGVudGlhbD1BS0lBVkNPRFlMU0E1M1BRSzRaQSUyRjIwMjQwOTA3JTJGdXMtZWFzdC0xJTJGczMlMkZhd3M0X3JlcXVlc3QmWC1BbXotRGF0ZT0yMDI0MDkwN1QwMjI2NDZaJlgtQW16LUV4cGlyZXM9MzAwJlgtQW16LVNpZ25hdHVyZT05ODNjMGMyZDg0MDZjNWUyYWMwNDI3NjM4MzhiZWY2ZjM3NThjNGYyYmQ2M2RhMTc3OWUwOWU5NDcyNDMyZWM3JlgtQW16LVNpZ25lZEhlYWRlcnM9aG9zdCZhY3Rvcl9pZD0wJmtleV9pZD0wJnJlcG9faWQ9MCJ9.etiYRn8WIE3aHNESCK8tUC8o4jch6Admyy5EZITWwxQ)
我在尝试默认安装SCP时,默认是安装的SeuratV5,而导致无法运行,因此调试后将Seurat降为4.4.0,SeuratObject保持V5,可以运行CellQC,但在进行Standard_SCP时,输出的文件中缺少了“Celltpye”,"SubCelltype"等文件。请问这应该如何解决呢
谢谢。
The text was updated successfully, but these errors were encountered: