New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

how to reduce run time for RunDynamicFeatures #234

Open

nbutyrate opened this issue Apr 12, 2024 · 0 comments

nbutyrate commented Apr 12, 2024

Hi,

The following is running from past 12 hrs, but no success, is there any way to speed this up? thanks for your help in advance.

N <- DynamicPlot(

srt = ALL_B_yo_b_new_normal,
lineages = c("Lineage1", "Lineage1"),
features = c("PTGS1", "HPGDS"),
group.by = "CellType",
compare_lineages = TRUE,
compare_features = FALSE
)
[2024-04-11 21:05:29] Start RunDynamicFeatures
Workers: 14
Number of candidate features(union): 2
Calculate dynamic features for Lineage1...

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment