- 👋 Hi, I’m @AhmedElsherbini
- 👀 I’m interested in Bacterial, Viral genomics and Microbiome data analysis
- 🌱 I’m just learning and trying to improve my skills in bioinformatics , machine learning and in wet-lab work :))
- 📫 How to reach me? I'm a fast responder, just mail me.Looking forward to talking with you :))
🎯
Focusing
Tübingen Uni, Ph.D. student, Infection Biology
(Nile Uni, Bioinformatics Diploma &
Antwerp Uni, Infectious Diseases MSc)
Prokaryotic
genomics & metagenomics
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download_hmp_data
download_hmp_data PublicDownload Human microbiome project (WGS) data from hmpdacc.org via https
Python 3
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ISEScan_stats
ISEScan_stats PublicCondense and summarize many results form ISEScan into CSV for heatmaps
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MicrobeAnnotator_stats
MicrobeAnnotator_stats PublicCondense and summarize MicrobeAnnotator metabolic pathway tab files from many genomes into a big heatmap CSV files
Python 1
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Cblaster_stats
Cblaster_stats PublicParse binary files from Cblaster into more useful information
Python 1
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