Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

ENH: Add KDA runtime to KAPattern comparison #23

Merged
merged 4 commits into from
Jul 31, 2024

Conversation

nawtrey
Copy link
Collaborator

@nawtrey nawtrey commented Jul 22, 2024

  • Updates comparison.py to output the KDA expression generation time

  • Updates comparison_output.txt with updated run on Lorentz

  • Adds test_lambda_funcs.py which outputs
    timing statistics on KDA state probability
    expression evaluations using timeit

  • Adds test_lambda_funcs_output.txt which
    contains the terminal output for a run
    with 5 different kinetic diagrams from
    the KDA verification data

  • README updated to include description
    for test_lambda_funcs.py

* Updates `comparison.py` to output the KDA
expression generation time

* Updates `comparison_output.txt` with updated
run on Lorentz
@nawtrey nawtrey added the enhancement New feature or request label Jul 22, 2024
* Add `test_lambda_funcs.py` which outputs
timing statistics on KDA state probability
expression evaluations using `timeit`

* Add `test_lambda_funcs_output.txt` which
contains the terminal output for a run
with 5 different kinetic diagrams from
the KDA verification data

* README updated to include description
for `test_lambda_funcs.py`
@nawtrey
Copy link
Collaborator Author

nawtrey commented Jul 30, 2024

Oops. It looks like pytest picked up the newly added file due to its name (i.e. test_). I'll change the file names and push an update.

@nawtrey nawtrey merged commit aa869dd into master Jul 31, 2024
4 checks passed
@nawtrey nawtrey deleted the update_kapattern_comparison branch July 31, 2024 05:05
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant