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@CCICB

Computational Biology Group @ Children's Cancer Insitute

The Computational Biology Group @ Children's Cancer Insitute develop better tools for precision medicine. WGS, RNAseq, multi-omics, health data

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  1. introme introme Public

    Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation

    Shell 19 3

  2. 2020-hrPC-landscape 2020-hrPC-landscape Public

    development version for the Landscape paper

    R 5 3

  3. CRUX CRUX Public

    R 2 1

  4. SpliceAI-blackbox SpliceAI-blackbox Public

    Using explainable AI to crack open the black box of SpliceAI

    Python 2

  5. TCGAgistic TCGAgistic Public

    Easily access TCGA gistic data

    R 2

  6. somaticflags somaticflags Public

    Database of genes whic frequently sustain somatic mutations, but are unlikely to drive cancer

    R 1

Repositories

Showing 10 of 25 repositories
  • CBWebsite Public
    CCICB/CBWebsite’s past year of commit activity
    0 0 0 0 Updated Aug 14, 2024
  • SpliceVarDB Public
    CCICB/SpliceVarDB’s past year of commit activity
    HTML 0 AGPL-3.0 0 0 0 Updated Aug 13, 2024
  • somaticflags Public

    Database of genes whic frequently sustain somatic mutations, but are unlikely to drive cancer

    CCICB/somaticflags’s past year of commit activity
    R 1 0 1 0 Updated Jul 7, 2024
  • rig Public

    Identify radiation induced gliomas using a gene expression signature

    CCICB/rig’s past year of commit activity
    R 0 0 0 0 Updated Jun 23, 2024
  • TCGAexpression Public

    What the Package Does (One Line, Title Case)

    CCICB/TCGAexpression’s past year of commit activity
    R 0 0 0 0 Updated Apr 23, 2024
  • introme Public

    Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation

    CCICB/introme’s past year of commit activity
    Shell 19 GPL-3.0 3 2 0 Updated Mar 20, 2024
  • SplicingGuidelines2024 Public

    Supporting code for figures in our 2024 Splice Guidelines Manuscript (Sullivan et al)

    CCICB/SplicingGuidelines2024’s past year of commit activity
    0 MIT 0 0 0 Updated Mar 11, 2024
  • microbialpanels Public

    Curated collections of related microbes

    CCICB/microbialpanels’s past year of commit activity
    R 0 0 0 0 Updated Mar 11, 2024
  • CRUX Public
    CCICB/CRUX’s past year of commit activity
    R 2 1 54 0 Updated Dec 7, 2023
  • vcf2mafR Public

    Convert VCFs and VCF-related formats to MAF

    CCICB/vcf2mafR’s past year of commit activity
    R 1 1 11 0 Updated Nov 29, 2023
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