Welcome to 'Metagenomics in R for Dummies'! 🦠 (a.k.a. metaRdum)
In this repository you will learn how to use QIIME2 in R and be able to perform the following activities:
- Data generation and cleaning
- Calculation of alpha and beta diversity indices
- Bacterial composition analysis
Material suplementario:
- Alpha diversity (Conteville, 2021): https://rpubs.com/lconteville/713954
- Microbiota analysis in R, UCR Workshop 2018 (Dill-McFarland K. & Cox M., 2018): https://rpubs.com/maddieSC/R_SOP_UCR_Jan_2018
Any questions or doubts regarding the scripts used in this project, you can consult [email protected]
Until another chance! 👏