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SigHunt: Tool for horizontal gene transfer detection.

This is reimplementation of SigHunt: horizontal gene transfer finder optimized for eukaryotic genomes.

Original SigHunt had poor implementation and was burden with many problems, using it was hell. There lies a new implementation, that should get rid of all these problems, making analysing signatures and subsequent verification of putative islands much easier.

As is standard lately among R packages, new SigHunt will utilize:

  • testthat -- for proper code testing
  • roxygen2 -- for automatic generation of documentation
  • Rcpp -- for C++ binding where more power is needed

and many others.

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