test-coverage #331
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| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - '**' # matches every branch | |
| schedule: | |
| # * is a special character in YAML so you have to quote this string, it is set up to run at 6am | |
| # on the first day of the month, this is helpful for periods of time when PRs are not being merged. | |
| - cron: '0 6 1 * *' | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| name: test-coverage | |
| jobs: | |
| test-coverage: | |
| # Don't run scheduled job on forks, only in main repository. | |
| if: (github.event_name == 'schedule' && github.repository == 'JGCRI/hector') || (github.event_name != 'schedule') | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: 'release' | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| uses: actions/cache@v1 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: macOS-r-4.0-2-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: macOS-r-4.0-2- | |
| - name: Install libcurl | |
| run: sudo apt-get install libcurl4-openssl-dev | |
| - name: Install dependencies | |
| run: | | |
| install.packages(c("remotes")) | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("covr") | |
| shell: Rscript {0} | |
| - name: Test coverage | |
| run: covr::codecov() | |
| shell: Rscript {0} |