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fetch_mmtf
no longer works
Component-Core
Component-Readers
deprecation
#4634
opened Jul 7, 2024 by
IAlibay
Keep the page when switching versions in documentation
Component-Docs
#4629
opened Jun 29, 2024 by
yuxuanzhuang
inconsistent storage of Deprecated functionality to give advance warning for API changes.
times
and frames
attributes in AnalysisBase
classes
Component-Analysis
deprecation
Downloading / Streaming Trajectories from MDDB
interoperability
important for making MDAnalysis work with other packages and tools
new-feature
streaming
#4603
opened May 21, 2024 by
BradyAJohnston
H5MD
Can not read observables/<group>/<observable>/...
defect
Format-H5MD
#4598
opened May 17, 2024 by
PythonFZ
Issue when reading 4000+ pdb files in the same Universe
Format-ChainReader
ChainReader virtual trajectory reader
Format-PDB
#4590
opened May 6, 2024 by
samuelmurail
Add example for writing to NamedStream StringIO buffer
Component-Docs
#4583
opened May 1, 2024 by
hmacdope
Benchmark guessers with asv
benchmarks
performance benchmarking with ASV
#4577
opened Apr 24, 2024 by
lilyminium
Explore solutions for codecov upload failures
Continuous Integration
#4576
opened Apr 23, 2024 by
RMeli
Add code coverage options due to many
codecov
failures recently
Continuous Integration
#4574
opened Apr 21, 2024 by
marinegor
TST, MAINT: test_thread_limit_apply failure with NumPy 2.1.0.dev
maintainability
#4570
opened Apr 19, 2024 by
tylerjereddy
PDB Reader can stream from AWS s3 buckets with minimal modification
Component-Docs
Component-Readers
Format-PDB
streaming
#4568
opened Apr 19, 2024 by
ljwoods2
Create
sugar
or carbohydrate
selection using GLYCAM nomenclature
Component-Selections
Difficulty-easy
enhancement
help wanted
#4563
opened Apr 12, 2024 by
hmacdope
H5MDReader/Writer
undocumented limitations
Component-Docs
Format-H5MD
#4561
opened Apr 8, 2024 by
edisj
BUG: streamlines only returns the dx_array, dy_array of last frame
Component-Analysis
defect
#4549
opened Apr 1, 2024 by
lilyminium
remove MDAnalysis.visualization in 3.0
Component-Visualization
remove-3.0
deprecated and remove in release 3.0
remove analysis.waterdynamics in 3.0
Component-Analysis
remove-3.0
deprecated and remove in release 3.0
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