University of Tartu, International Summer University, Tartu, 01-05 August, 2022
https://mycology-microbiology-center.github.io/Metabarcoding2022/
https://ut.ee/en/content/metabarcoding-lab-bioinformatics
High-throughput metabarcoding methods have become a routine analysis tool in biodiversity research and ecology in general. This course will cover the principles of metabarcoding workflow, from the laboratory analyses to bioinformatic analyses of the high-throughput sequencing data.
Laboratory work includes steps for sample preparation, DNA extraction, PCR and sequencing library preparation. The practical sessions are supplemented with theoretical lectures.
Hands-on metabarcoding data set analyses will mostly follow PipeCraft 2 pipeline (user-friendly graphical user interface software for non-bioinformaticians) but basics of command-line interface and usage of high-performance clusters will be also covered.
🇪🇪🇧🇪🇧🇷🇨🇳🇭🇷🇩🇪🇮🇩🇮🇹🇱🇹🇲🇽🇷🇴🇺🇦