1.6.0: Merge pull request #142 from NuttyLogic/dev

• MethylDackel Support
• Option to output alignments to stdout

BSBolt

• Improved thread handling
• Experimental bisulfite aware SNP caller

BSBolt

• Implemented alignment stats streaming
• Fixed bug that stopped alignments with low observed mappability
• Updated documentation with publication information
• Cleaned masked alignment / index unit tests
• Fixed bug ending alignment when the reference template end greater than reference boundary

BSBolt

• fixed methylation calling bug for sites covered by greater than 8000 reads

BSBolt

• conda build recipe
• simplified build instructions

BSBolt Publication Release

Merge pull request #103 from NuttyLogic/development

- fixed ZeroDivisionError when no alignment returned

1.3.3: Merge pull request #98 from NuttyLogic/development

- Undirectional Simulation fix

v1.2.2

Merge pull request #88 from NuttyLogic/development

Cleaned Documentation